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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cucsa.012940.1 |
Common Name | Csa_3G354510, LOC101211855 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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Family |
WRKY |
Protein Properties |
Length: 349aa MW: 38311.3 Da PI: 4.6397 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cucsa.012940.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 92.8 | 2.6e-29 | 142 | 203 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg++WrKYGqK + g+++pr+YYrCt++ gC ++k+v+rs++dp+++eitY+g+H ++
Cucsa.012940.1 142 LDDGFAWRKYGQKGILGAKHPRGYYRCTHRnlqGCLATKQVQRSDDDPTIFEITYRGKHSCS 203
59***************************99999*************************997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MENFGEWDQN KLKNELLKGM ELAKQLQIQL NVRPTPSSSM AAAAASSSSS SSSSSDGCEL 60 LVQKIICSYE KALSLLNSYG VQIMYESPSS FNGGSPRSED SDREFKDPFD LTNANSFRKR 120 NILPTWTQKF QVSPGMAIEG SLDDGFAWRK YGQKGILGAK HPRGYYRCTH RNLQGCLATK 180 QVQRSDDDPT IFEITYRGKH SCSQVSNLST PCTTTPEFQQ QNQAPDALLD SWSSLRVITQ 240 NLDTTPLSYD RVEFASASTV DVNFAEFSSF LSPTTSGSGL SYFSASSSGL SEGFVGNQNL 300 NNLQPNNCEI FSSPTSALNT QTTTALDFSF GELQMEPTFS FDNTDFFS*
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