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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa17g024610.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
Nin-like |
Protein Properties |
Length: 228aa MW: 25970.7 Da PI: 8.3585 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa17g024610.1 | genome | CSGP | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 83.4 | 2.1e-26 | 91 | 141 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
+k++s e++s yF++pi++AAkeL+++lT+LK++CR++GI+RWPhRk+ sl
Csa17g024610.1 91 SKTLSKETISLYFYMPITQAAKELNIGLTLLKKRCRELGIQRWPHRKLMSL 141
5899********************************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 228 aa
Download sequence Send
to blast |
ELANLFFDLK DDFPPSAYSN NYLPSSSSFL ALPDLDPISI VSLDDLLSGC GSVSWTEEES 60 MLDLDLEKKS ETISTKKRRC REECVSSCSV SKTLSKETIS LYFYMPITQA AKELNIGLTL 120 LKKRCRELGI QRWPHRKLMS LQKLISNVKE LQKMEGEENE DKLRNALEKL EKEKETIEKL 180 PDLKFEDKTK RLRQACFKAN HKRKRRHGMS TSFTSSSSSS SVSGLSDS
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC011809 | 1e-102 | AC011809.2 Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete sequence. |
GenBank | CP002684 | 1e-102 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |