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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa15g016140.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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| Family |
bZIP |
| Protein Properties |
Length: 371aa MW: 41502.1 Da PI: 9.8185 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa15g016140.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 30.4 | 8.6e-10 | 71 | 111 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L
Csa15g016140.1 71 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 111
7889************************9877777766555 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 371 aa
Download sequence Send
to blast |
MAIQIIEIRG LARNLHLLVL LSYFLENVTR GRLAPGSLGK TWDDLPSERG QMMLAAASDS 60
SDRSKDKLDQ KTLRRLAQNR EAARKSRLRK KAYVQQLENS RLKLTQLEQE LQRARQQGVF 120
ISSSGDQAHS TGGNGALAFD AEHSRWLEEK NKQMNELRSA LNAHAGDTEL RTIVDGVMAH 180
YEELFRIKSN AAKNDVFHLL SGMWKTPAER CFLWLGGFRS SELLKVISLQ VHRENFDGQT 240
NLNESLEPMT ERQVMGLNSL QQTSQQAEDA LSQGMESLQQ SLADTLSSGT LGSTSSDNVA 300
SYMGQMAMAM GQLGTLEGFI RQADNLRLQT LQQMLRVLTT RQSARALLAI HDYSSRLRAL 360
SSLWLARPRE *
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB493610 | 0.0 | AB493610.1 Arabidopsis thaliana At3g12250 mRNA for hypothetical protein, partial cds, clone: RAAt3g12250. |
| GenBank | AJ320540 | 0.0 | AJ320540.1 Arabidopsis thaliana mRNA for transcription factor TGA6 (AtbZIP45 gene). |
| GenBank | AK175452 | 0.0 | AK175452.1 Arabidopsis thaliana mRNA for bZip transcription factor TGA6 / AtbZip45, complete cds, clone: RAFL21-87-N17. |
| GenBank | AK176850 | 0.0 | AK176850.1 Arabidopsis thaliana mRNA for bZip transcription factor TGA6 / AtbZip45, complete cds, clone: RAFL25-40-P05. |
| GenBank | BT029515 | 0.0 | BT029515.1 Arabidopsis thaliana At3g12250 mRNA, complete cds. |
