 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Csa11g051880.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
|
| Family |
Nin-like |
| Protein Properties |
Length: 260aa MW: 29130.7 Da PI: 5.1615 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Csa11g051880.1 | genome | CSGP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 67.6 | 1.8e-21 | 172 | 216 | 3 | 47 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhR 47
k++s e +s yF+++i++AAkeL+++lT+LK++CR++GI+RWPh
Csa11g051880.1 172 KTLSKEIISLYFYKSITQAAKELNIGLTLLKKRCRELGIQRWPHH 216
78999**************************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MMMNSFCKLE YDQVFGKEDH SFSFLNHSSL YSHQSELANL FLGLEDDFPP SASSFLALPD 60
CLPSASSFLA LXPVDSDLAN LFFGLEDDFP PSASSFLALP DYLPSASSVL ALPNLDPISI 120
VSLDDLLSGY SSVSWTEEES MLDFDLEKKS ETISTKKRRC REECVSSCSV WKTLSKEIIS 180
LYFYKSITQA AKELNIGLTL LKKRCRELGI QRWPHHQKVQ GKSRTTDQTV SFSCADVRSQ 240
GSREEQNVNL PRISKQHIR*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. {ECO:0000250}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AC011809 | 5e-75 | AC011809.2 Arabidopsis thaliana chromosome I BAC F6A14 genomic sequence, complete sequence. |
| GenBank | CP002684 | 5e-75 | CP002684.1 Arabidopsis thaliana chromosome 1 sequence. |
