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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Csa01g022890.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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Family |
bHLH |
Protein Properties |
Length: 286aa MW: 31972.7 Da PI: 8.6299 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Csa01g022890.1 | genome | CSGP | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 27.7 | 4.9e-09 | 7 | 55 | 2 | 54 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
+ + rE+ RR+++N+ f eL +l + +K++Ka+iL+ +v+ +k+L
Csa01g022890.1 7 KSQKAGREKLRREKLNEHFVELGNVLDPE----RPKNDKATILTNTVQLLKEL 55
5566779******************9987....69***************998 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 286 aa
Download sequence Send
to blast |
MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTNTVQ LLKELTSEVN 60 KLKSEYTALT DESRELTQEK NDLREEKTAL KSDIENLNLQ YQQRLRSMSP WGAAMDHTVM 120 MASPPSFPYP MPMAMPPGSI PMHPSMPSYT YFENQNPSMI PAPSPTYMPY MPPNTVVEQQ 180 SVHIPQNPPG SRSREPRAKV SRESRSEKAE DSNEVATQLE LKTPGSTSDK DTVQRPEKTK 240 RCKRNNNNNS TEESSHSSKC SSSPSIRDHS SSSSVAGGQK PDDAK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK317507 | 0.0 | AK317507.1 Arabidopsis thaliana AT3G19860 mRNA, complete cds, clone: RAFL25-09-J11. |
GenBank | AY065107 | 0.0 | AY065107.1 Arabidopsis thaliana unknown protein (At3g19860; MPN9.10) mRNA, complete cds. |
GenBank | AY081703 | 0.0 | AY081703.1 Arabidopsis thaliana unknown protein (At3g19860) mRNA, complete cds. |