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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_37008_BGI-A2_v1.0 |
Common Name | F383_08391 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
bZIP |
Protein Properties |
Length: 429aa MW: 46410.5 Da PI: 6.2373 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_37008_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 44.5 | 3.3e-14 | 214 | 269 | 3 | 58 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58
+ kr+rr+ +NRe+ArrsR+RK+a++ eLe v +L e ++L k+l ++ ++++
Cotton_A_37008_BGI-A2_v1.0 214 DAKRARRMRSNRESARRSRRRKQAQLNELEAQVGQLRVEHSTLLKRLTDMNHKYDE 269
68******************************************888877777665 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:2000693 | Biological Process | positive regulation of seed maturation |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 429 aa
Download sequence Send
to blast |
MNTVFSVDDF SDSFWAAPAS DDALGMTRSH SEWALERFLE EFSGAGVAIS GSHAGENVIG 60 PSLMSPQSSV SKVEEGNVVE IKRPNSQNHN HPPSDQTPTV PTDSDDYHTI LKSKLELECA 120 AVALSRALAV KAEDSSAEAE NHALPSGSKV QGSSKVQGQG ETDVAHCGTL TGSTTQKKSG 180 VQVRQATSGL SREDSDSDEL EGDTETADNM DPADAKRARR MRSNRESARR SRRRKQAQLN 240 ELEAQVGQLR VEHSTLLKRL TDMNHKYDEA AVDNRIMKAD IETLRAKVKM AEETVKRVTG 300 FNPALLSRPN VPSVGMPFGS NPLEASTVAP LPFQSNANQF FHQPVPNIVA PIHHQRVDNS 360 FRANTLVPPD VNSQTKGVKN VNETSVLQHG PSLDCVPNQI GPGVSPCGPM PGWEPGLLPH 420 ASDRNHKQC
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 228 | 235 | RRSRRRKQ |
2 | 230 | 235 | SRRRKQ |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JX577303 | 2e-35 | JX577303.1 Gossypium hirsutum clone NBRI_GE9096 microsatellite sequence. |