 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cotton_A_23932_BGI-A2_v1.0 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
Family |
bZIP |
Protein Properties |
Length: 343aa MW: 38799.9 Da PI: 7.6201 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_23932_BGI-A2_v1.0 | genome | BGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 32.2 | 2.3e-10 | 62 | 102 | 3 | 40 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLea 40
+k +rr+++NReAAr+sR RKka++++Le k ++Le+
Cotton_A_23932_BGI-A2_v1.0 62 TDKIQRRLAQNREAARKSRMRKKAYVQQLESsrlKLAQLEQ 102
7899**************************83333444444 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 343 aa
Download sequence Send
to blast |
MAIYEQFHHI SRWADTFNSD NSPNIGSSTI VPADVRLKNK AECIPCEQVE PSISDQETNK 60 PTDKIQRRLA QNREAARKSR MRKKAYVQQL ESSRLKLAQL EQELERARQQ GIHIAGASDA 120 GYFGLSGTVN SGITSFEMEY RHWVEEQNRL ICELRTAVQA HVTDIELRIL VESGLNHYYN 180 LFRMKADAAK ADVFYLISGI WRTSAERFFH WIGGFRPSAL LNVVVPQIEP LTDQQHLEVC 240 NLRQSSQQAE DALSQGVEKL QQSLAESVAS DLCSGNYRAQ MVAAIDKLEA LENFVSQADH 300 LRQQTLQQMA RILTARQAAR GLLAMGEYFH RLRALSSLSA ARP
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AC243092 | 1e-127 | AC243092.1 Gossypioides kirkii clone GKH058K14-jmr, complete sequence. |