 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cotton_A_20714_BGI-A2_v1.0 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
| Family |
bZIP |
| Protein Properties |
Length: 189aa MW: 21810.9 Da PI: 8.2466 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cotton_A_20714_BGI-A2_v1.0 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 30.2 | 9.7e-10 | 117 | 163 | 1 | 47 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47
e++ k+e k+kNReAA r + Kka+i+ Le +v+++ ++N ++k
Cotton_A_20714_BGI-A2_v1.0 117 EAAEKKELHKIKNREAAARAFEEKKAYIKWLEVEVEKFRKKNADMKR 163
6778****************************************995 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MEQLKNEDEF CGQRAQHLDM KLLLQDDDAF ESIFFPPTLL DYNLTNINEL IDFDELHSIL 60
NEGEVNQGHD QGGSCHGSTT TMVTTAELMN VKPKLNNEQH VIKKWRTRKR LERGSKEAAE 120
KKELHKIKNR EAAARAFEEK KAYIKWLEVE VEKFRKKNAD MKRLLLVLGS SIGSDMARKQ 180
LRRTASGLL
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | JX582077 | 2e-67 | JX582077.1 Gossypium hirsutum clone NBRI_GE14853 microsatellite sequence. |
