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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cotton_A_19761_BGI-A2_v1.0 |
Common Name | F383_13422 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family |
DBB |
Protein Properties |
Length: 212aa MW: 23182 Da PI: 5.3345 |
Description |
DBB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cotton_A_19761_BGI-A2_v1.0 | genome | BGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 23.7 | 9.7e-08 | 3 | 33 | 4 | 34 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34
++C+ +++ +++fC ++ lC++C ++ H
Cotton_A_19761_BGI-A2_v1.0 3 TICDVCDSAAAIIFCAADEAALCRSCDEKVH 33
68**************************998 PP
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2 | zf-B_box | 28.9 | 2.4e-09 | 52 | 91 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37
+ ++C+ +e+ ++ ++Ce +++ lC +C + H g H
Cotton_A_19761_BGI-A2_v1.0 52 NVPRCDICENAPAFFYCEVDGSSLCLQCDMIVHVGgkrtH 91
789***************************9995544455 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MRTICDVCDS AAAIIFCAAD EAALCRSCDE KVHMCNKLAN RHVRVGLADP SNVPRCDICE 60 NAPAFFYCEV DGSSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFPGDKPGR LEEPGLQPLS 120 PDEVRKDLNQ QSKLAVRENR QNRGVSHVPL LDDNAKGDGE VGNELIDLNA RPQQVQGQAS 180 INQEQAMDVS SGNNHDSTSG IPGGSFKQEP EK
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Functional Description ? help
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Source |
Description |
UniProt | Acts as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}. |