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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cla018973 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
| Family |
NAC |
| Protein Properties |
Length: 345aa MW: 39380.6 Da PI: 7.6916 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cla018973 | genome | ICuGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 173.6 | 5.7e-54 | 5 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelv 100
lppGfrFhPtdeel+++yL++k+++++++ ++i vd++k ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke++ +++ lv
Cla018973 5 LPPGFRFHPTDEELISYYLTQKLSDSSFTS-KAIGVVDLNKNEPWDLPAKATMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFGTGHVLV 103
79*************************999.88***************999999****************************************9***** PP
NAM 101 glkktLvfykgrapkgektdWvmheyrl 128
g+kktLvfykgrap+gek++Wvmheyr
Cla018973 104 GMKKTLVFYKGRAPRGEKSNWVMHEYRQ 131
**************************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MEENLPPGFR FHPTDEELIS YYLTQKLSDS SFTSKAIGVV DLNKNEPWDL PAKATMGEKE 60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFGTGH VLVGMKKTLV FYKGRAPRGE 120
KSNWVMHEYR QQTNHFFKPS KEEWVVCRVF QKQNTPKKPQ QSSSSQPSLS SPCDTNSIVN 180
EFGDIELSNF NNSNNTSSSG NFNNIISSQT YENSNMINNN MMNMNMNLNL NNWATPTNYD 240
QTLPSLSWPL NSNNLLSSSN LSMNSLLLKA LQLRTFQQQR DNVLASSSST TFNNINHDQP 300
NIIHSQFGTT NDHLSFQASS SSKVFESSSQ QQQQQEQPLN LDSLW
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 4e-54 | 4 | 158 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 4e-54 | 4 | 158 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 4e-54 | 4 | 158 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 4e-54 | 4 | 158 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 4e-54 | 4 | 158 | 19 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 4e-54 | 4 | 158 | 16 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 4e-54 | 4 | 158 | 16 | 171 | NAC domain-containing protein 19 |
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