 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla014910 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
Family |
NAC |
Protein Properties |
Length: 201aa MW: 23304.3 Da PI: 8.2146 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla014910 | genome | ICuGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 97.4 | 2.1e-30 | 8 | 84 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ kewyfFs rd+ky +g+r+nrat +gyWkatgkd+ v++ +ge++g++ktLvfy++rap+g kt W+mhe+r+
Cla014910 8 LNGKEWYFFSFRDRKYGRGERANRATIEGYWKATGKDRMVMNPkSGEVMGMRKTLVFYRNRAPNGIKTAWIMHEFRI 84
4679*************************************9878889***************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 201 aa
Download sequence Send
to blast |
MNAEVAKLNG KEWYFFSFRD RKYGRGERAN RATIEGYWKA TGKDRMVMNP KSGEVMGMRK 60 TLVFYRNRAP NGIKTAWIMH EFRIQNPHFP SKEDWVLCRV FHKSKRDEIT PETTHMDPGF 120 DMAAPASAPS SLCSPWSYVQ FPPAAEANMV PWNNINNNVE EVAGGFRSNG VDHDYSTIQR 180 MKFEIEDSIQ NDFIPFEYFI A
|
3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-27 | 6 | 103 | 66 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-27 | 6 | 103 | 66 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-27 | 6 | 103 | 66 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-27 | 6 | 103 | 66 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swm_B | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swm_C | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swm_D | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swp_A | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swp_B | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swp_C | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
3swp_D | 2e-27 | 6 | 103 | 69 | 168 | NAC domain-containing protein 19 |
4dul_A | 2e-27 | 6 | 103 | 66 | 165 | NAC domain-containing protein 19 |
4dul_B | 2e-27 | 6 | 103 | 66 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help
Back to Top |
Source |
Description |
UniProt | INDUCTION: Induced by auxin. |
Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance. J. Exp. Bot., 2013. 64(16): p. 4877-93 [PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis. BMC Plant Biol., 2015. 15: p. 266 [PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. Plant Physiol., 2016. 170(4): p. 2136-45 [PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth. Plant Physiol., 2018. 176(1): p. 742-756 [PMID:29122985]
|