PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cla011083 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 247aa MW: 27765.5 Da PI: 9.9005 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 38.6 | 2.4e-12 | 203 | 246 | 5 | 48 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 +r +rk+kNRe+A rsR+RK+a+ eL +kv Le+eN +Lkke Cla011083 203 RRLKRKIKNRESAARSRARKQAYHNELVNKVSRLEEENLKLKKE 246 689**************************************997 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.9E-11 | 193 | 246 | No hit | No description |
SMART | SM00338 | 0.0061 | 199 | 246 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.909 | 201 | 247 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 9.85E-9 | 203 | 246 | No hit | No description |
Pfam | PF00170 | 1.4E-10 | 203 | 246 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.26E-15 | 203 | 245 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 206 | 221 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 247 aa Download sequence Send to blast |
MGIQTMGSQL NGQQSHLQPA PLTRQNSWYG LTLDEVKNQL GEMGKPLGSM NLDELLHNIW 60 TAEANQSMGM ESESSSSVYS LKRQASFKLA RALSGKTVDD VWREIQQGQK KKNHENLKSE 120 NSEIILGDMT LEDFLIQAGI YAEASPSPIM GLDAIDTMAL AEKNFSQKMG LLSSSPSLGT 180 LSDTTTPKRR RDPSDTLEKT MERRLKRKIK NRESAARSRA RKQAYHNELV NKVSRLEEEN 240 LKLKKEK |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | HQ876930 | 0.0 | HQ876930.1 Cucumis melo bZIP1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_022147693.1 | 1e-147 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Swissprot | Q9LES3 | 2e-55 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A0A0LX90 | 1e-137 | A0A0A0LX90_CUCSA; Uncharacterized protein | ||||
STRING | XP_004169745.1 | 1e-137 | (Cucumis sativus) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12464 | 25 | 32 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-41 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
---|---|---|---|
|