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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cla010176 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
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Family |
TCP |
Protein Properties |
Length: 353aa MW: 37417.4 Da PI: 9.7333 |
Description |
TCP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cla010176 | genome | ICuGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCP | 130.9 | 1.2e-40 | 60 | 221 | 2 | 125 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88
++k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++
Cla010176 60 PPKRATTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSTISAPshlrtsyfsptq 159
789******************************************************************9998777777777755555666666776543 PP
TCP 89 .......kaaksaakskksqksaasalnlakesr...........................akarararer 125
+ ++++++++nl ++s+ +k r+++ e+
Cla010176 160 favrtrsD---------LWDRNNNHNHNLVDDSStflnfnapnyvnvfkqdqggidvteagKKRRSEQSES 221
33222220.........223333333444444444444444444555555556666655544444444444 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MDGENGIRRP NFPLQLLEKK KEEQQQPCSS SANNGGTTTT TITTTPNPNL QSSSSPKKPP 60 PKRATTKDRH TKVDGRGRRI RMPALCAARV FQLTRELGHK SDGETIEWLL QQAEPAVIAA 120 TGTGTIPANF TSLNISLRSS GSTISAPSHL RTSYFSPTQF AVRTRSDLWD RNNNHNHNLV 180 DDSSTFLNFN APNYVNVFKQ DQGGIDVTEA GKKRRSEQSE SSSDNYLVQT STGSIPASQS 240 SPLPATFWMV TNPSNQGSDP MWTFPSVGNS SMLRGAGAGG GGGGGGGGFH FMNLPPPMAL 300 LPSGQQLGTG IGSGGGPATE SHLGMLAALS AYRTTMPGLS VSESPTSNNP DQS
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