PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cla009927
Organism
Citrullus lanatus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Citrullus
Family bZIP
Protein Properties Length: 385aa    MW: 43541.5 Da    PI: 9.1379
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cla009927genomeICuGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.5e-1098140345
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Cla009927  98 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 140
                568899************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-889143No hitNo description
PfamPF077165.1E-796142IPR004827Basic-leucine zipper domain
SMARTSM003389.8E-896159IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.41598142IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-7100143No hitNo description
CDDcd147081.04E-20100152No hitNo description
PROSITE patternPS000360103118IPR004827Basic-leucine zipper domain
PfamPF141443.4E-33182257IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    Send to blast
MVTEGEWTRQ VEKEMRRKWQ TGCQVSLQRC PFVTNLMPLV SLPCSITENL KVYAMTDVSP  60
RTDISTDVDT DEKNQRLDML QRNVVASDSS DRTKDKSDQK TLRRLAQNRE AARKSRLRKK  120
AYVQQLESSR LKLTQLEQEL QRARQQGIFI SSSGDQAHSM AGNGAIAFDV EYARWLEEQN  180
KQINELRAAV NSHASDTELR MIVDGILAHY DEVFRLKGVA AKADVFHLLS GMWKTPAERC  240
FLWLGGFRSS ELLKLLVNQL EPLTEQQLMG ISNLQQSSQQ TEDALSQGME ALQQSLAETL  300
SSGSLGSSNM SGNVANYMGQ MATAMGKLGT LEGFIRQADN LRQQTLQQMH RILTIRQSAR  360
ALLAIHDYFS RLRALSSLWL ARPKE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004142384.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011655926.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011655927.10.0PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A0A0KV590.0A0A0A0KV59_CUCSA; Uncharacterized protein
STRINGXP_004142384.10.0(Cucumis sativus)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-151TGACG motif-binding factor 6