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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10027184m |
Common Name | CICLE_v10027184mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
ZF-HD |
Protein Properties |
Length: 220aa MW: 24899.1 Da PI: 8.9555 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10027184m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 99.6 | 2.2e-31 | 40 | 94 | 2 | 57 |
ZF-HD_dimer 2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57
+ vrYkeClkNhAa++Gg a+DGCgEfmps geeg++++lkC+AC+CHRnFHR+e
Ciclev10027184m 40 KVVRYKECLKNHAAAIGGSATDGCGEFMPS-GEEGSIESLKCSACNCHRNFHRKEI 94
679**************************9.999********************96 PP
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2 | Homeobox | 15.7 | 2.5e-05 | 152 | 208 | 1 | 53 |
TT--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
Homeobox 1 rrkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRa 53
+r Rt+ft+eq e + ++ e + ++++++ ++ +++g++ r+ kvW +N ++
Ciclev10027184m 152 KRFRTKFTQEQKEKMLSFAEradwRIQKLDESVVQQFCQEIGIKRRVLKVWMHNNKQ 208
789***********987666776678****************************997 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 220 aa
Download sequence Send
to blast |
MNSSSSPPKE RQFIVLVNSS NSNGNIVVQD HEEEKNPCKK VVRYKECLKN HAAAIGGSAT 60 DGCGEFMPSG EEGSIESLKC SACNCHRNFH RKEIGCDAHY HHLHQQAMMM LSGNSGSAHS 120 ASDEKVERRG VVVGRPAPAD DDDHQKRMMM RKRFRTKFTQ EQKEKMLSFA ERADWRIQKL 180 DESVVQQFCQ EIGIKRRVLK VWMHNNKQSF AKKNSSSFD*
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Expression --
Description ? help
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Source |
Description |
Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor. {ECO:0000250}. |