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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Ciclev10015695m |
| Common Name | CICLE_v10015695mg |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
Trihelix |
| Protein Properties |
Length: 364aa MW: 42242.5 Da PI: 6.9647 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10015695m | genome | ICGC | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 84.9 | 9.9e-27 | 239 | 323 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
rW++ e++aLi +r+ +e+++ +k lWe++s+ mr+ g++rs k+Ckekwen+nk+++k e+ kk+ e+s+tc+yf++le
Ciclev10015695m 239 RWPEAEIQALIMLRTTLEHQFHGVGSKFSLWERISDGMRKMGYHRSGKKCKEKWENMNKYFRKSMENGKKH-LERSKTCQYFHDLE 323
8********************************************************************99.57778*******97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 364 aa
Download sequence Send
to blast |
MEKRTGDRES EFPQQITPFP ESINQPPVIE SVNAPLQKLR PIRRSPADDP PSFEAAADKS 60
LKFGSGSVAE SLGPMSMWFD TEDESSSSSD SDIHVDLFTE IKEPGSQKRK RKTRVKIETF 120
LESLVMKIMD KQEQMNKQLI DMIAKRERER VIREEAWKQQ EMERMKRDEE IRAQETARSI 180
ALISFIQNFL GHEIQLPQPA PVSNVEENGS KDGRNHAENN ITQNANNRKW PEACDPNRRW 240
PEAEIQALIM LRTTLEHQFH GVGSKFSLWE RISDGMRKMG YHRSGKKCKE KWENMNKYFR 300
KSMENGKKHL ERSKTCQYFH DLEMYRNRLV NPGNVTNFPN FENFSESDAS NFTNQEIAAK 360
IED*
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