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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10015362m |
Common Name | CICLE_v10015364mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
CO-like |
Protein Properties |
Length: 421aa MW: 45470.5 Da PI: 4.8358 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10015362m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 17.8 | 7e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
+C+ +++++ + +C+++ +lC +C + H H+
Ciclev10015362m 4 MCDFCGDQRSIVYCRSDAACLCLSCDRNVHLAnalskrHS 43
6**************************9994334555565 PP
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2 | zf-B_box | 22.8 | 1.9e-07 | 46 | 89 | 4 | 41 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg.......Htvvp 41
C++++++++ C + ++ lC++C +H g H++++
Ciclev10015362m 46 LLCERCNSQPALVRCAEERVSLCQNCDWIGH-GtstsassHKRQT 89
57*****************************.5588888888766 PP
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3 | CCT | 59.1 | 1.5e-20 | 361 | 404 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R +a+lRYkeK+ktRkF+K++rY+sRKa+A+ R RvKGrFvk+
Ciclev10015362m 361 RSKAVLRYKEKKKTRKFDKRVRYASRKARADVRRRVKGRFVKAG 404
889**************************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 421 aa
Download sequence Send
to blast |
MGYMCDFCGD QRSIVYCRSD AACLCLSCDR NVHLANALSK RHSRTLLCER CNSQPALVRC 60 AEERVSLCQN CDWIGHGTST SASSHKRQTI NCYSGCPSAS ELSSIWSFVL DFPSGGESAC 120 EQELGLMSIT DNSIKNSWGP NEDSISQNAA GGGVEANDVC DADKSNVRVG ATSVPGINST 180 TQNLDQIHGS ANNPPLPKLC CSATKGLAFC EDDDLYEDFN MDEMDLNFEN YEELFGVTLN 240 HSEELLENGG IESLFGTKDM SAADSNCQGA VAAEGSSAGL VNAMQPACSN AASADSIMST 300 KTEPILCFTA KQGHSSLSFS GLTGDSNAGD YQECDASSML LMGEPPWCPP CPETSFTSAS 360 RSKAVLRYKE KKKTRKFDKR VRYASRKARA DVRRRVKGRF VKAGEAYDYD PLTQTETRSY 420 *
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