 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Ciclev10015144m |
Common Name | CICLE_v10015144mg |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
|
Family |
ERF |
Protein Properties |
Length: 467aa MW: 51938.4 Da PI: 5.4725 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10015144m | genome | ICGC | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55 | 2.1e-17 | 219 | 269 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+ ae+Aa a+++ + kl+ge
Ciclev10015144m 219 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDRAEDAALAYDREAFKLRGE 269
59******9.**********955...5**************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009651 | Biological Process | response to salt stress |
GO:2000070 | Biological Process | regulation of response to water deprivation |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MAAAKNSSKS EKGVDEATEE MVRSQDWEID EGKDFDLSSF ERRQQWRPVL DEASVSQRPL 60 KKIRSPERHQ NPVKFSSSFD YQSPSISSVS PASASTLGSS SSRLVFPFAF DTSQQAIQFP 120 QQFPTSQLQT PLPNFHPPIQ PAQTQQQMIS FSAHQQQQGF PFFAGESMLP HQQHQRQLLQ 180 YWSDALNLSP RGRLMMNRIG PDGRPLFRPQ VQPLNTTKLY RGVRQRHWGK WVAEIRLPRN 240 RTRLWLGTFD RAEDAALAYD REAFKLRGEN ARLNFPELFL NKDKAAVSTD PGSNISSPPS 300 PYESSMPNRL QTQHAQNSLN SQVMSSEPIP APPPQPKVEI PDSESGLGSS EATASDDVLA 360 AAEGSGSGEG VSGSQELAWG EMAEAWFNAI PAGWGPGSPV WDDFDSSNNL LMPANLPFVN 420 QSQQEFPDSD RQRQHDNSVS AASSTSPPCP MKPFFWKDQD HPQDSS*
|