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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Ciclev10008982m |
Common Name | CICLE_v10008968mg |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family |
GATA |
Protein Properties |
Length: 313aa MW: 34787 Da PI: 10.0619 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Ciclev10008982m | genome | ICGC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 59.3 | 4.9e-19 | 176 | 209 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+tt+TplWR+gp+g+k+LCnaCG+++rk +
Ciclev10008982m 176 CSDCNTTTTPLWRSGPRGPKSLCNACGIRQRKAR 209
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 313 aa
Download sequence Send
to blast |
MTPVHLNPPH DSDPFQLAEE QKDDQHLHLL HSSSHNRAAS SSVSWTNFQD QRMIIMEESQ 60 QHDQKVDHSG SSNLQVFSSS SIQTKKMNNI TNNKLPIRKR EVGEGTTSEN GSSSSGKWMS 120 SKIRLMHKMI NSSSNSTATH ELAVKVTQKL QYHQLHDNSE VNSFNSSNSN NTMRACSDCN 180 TTTTPLWRSG PRGPKSLCNA CGIRQRKARR AMQAAAAVET GTIAATGGSP FAKIKLQIKD 240 KKPRTSHVSQ NKKQYRTLDP DPTHQYQSQR KLCFKDFAIA LSKNSALKQV FPQDVEEAAI 300 LLMELSCGFI HS*
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