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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Ciclev10001952m |
| Common Name | CICLE_v10001952mg |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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| Family |
ZF-HD |
| Protein Properties |
Length: 307aa MW: 34194.7 Da PI: 8.5078 |
| Description |
ZF-HD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Ciclev10001952m | genome | ICGC | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | ZF-HD_dimer | 99.2 | 3e-31 | 79 | 135 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
+rY+eClkNhAa +Gg+ +DGCgEfmps g+egt +alkCaAC+CHRnFHR+e + e
Ciclev10001952m 79 VIRYRECLKNHAACIGGNIFDGCGEFMPS-GDEGTLEALKCAACECHRNFHRKEIDGE 135
589*************************9.999********************98865 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 307 aa
Download sequence Send
to blast |
MMMEIKQENE TKTPRRDGNN DNGTAVYSFN THQTLDHNLQ RQQQQQQARS PNPDRVTSVI 60
GAAIAPISAG SNSKPPINVI RYRECLKNHA ACIGGNIFDG CGEFMPSGDE GTLEALKCAA 120
CECHRNFHRK EIDGETAQLI STGRRSAVML NPLQLPPPLP SPTMMHHHHH HQKYSISRHT 180
MSPSSAIVAP MNVAFGGGIS ESSSEDLSNV LHSEGVLQHQ PPAAPPPPPP FVLSKKRFRT 240
KFTQEQKDKM MEFAEKVGWR FQKQDDDQVD KFCAEVGIKR HVFKVWMHNN KNNIVKNKQE 300
PAADPV*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Mostly expressed in flowers and inflorescence. {ECO:0000269|PubMed:16428600}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Putative transcription factor. Binds DNA at 5'-ATTA-3' consensus promoter regions. Regulates floral architecture and leaf development. Regulators in the abscisic acid (ABA) signal pathway that confers sensitivity to ABA in an ARF2-dependent manner. {ECO:0000269|PubMed:16428600, ECO:0000269|PubMed:21059647, ECO:0000269|PubMed:21779177}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Repressed by abscisic acid (ABA) and ARF2. {ECO:0000269|PubMed:21779177}. |
