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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Ciclev10000607m | ||||||||
Common Name | CICLE_v10000608mg | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Family | EIL | ||||||||
Protein Properties | Length: 618aa MW: 70196.1 Da PI: 5.5824 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 521.5 | 3.5e-159 | 47 | 425 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraW 94 +el++rmw+d+mllk+lke++k+ ke ++++k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+LraW Ciclev10000607m 47 DELERRMWRDRMLLKKLKEQSKS----KEC-VDSAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAW 135 79******************998....677.999************************************************************ PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--T CS EIN3 95 WkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglsk 188 Wkekv+fdrngpaai+kyqa+++il++++++ + s++hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+ww++lgl+k Ciclev10000607m 136 WKEKVRFDRNGPAAIAKYQADHAILGKNEDCGS-VVSTPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWWPNGNEEWWPQLGLPK 228 *******************************77.9*********************************************************** PP T--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXXXXXXXXXXXX CS EIN3 189 dqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkqspkvtlsceq 280 d g+ppykkphdlkkawkvsvLtavikhm p+i++ir+l+rqsk+lqdkm+akes+++l+v+nqee++ ++++++ ++ + +s ++++s+++ Ciclev10000607m 229 DLGPPPYKKPHDLKKAWKVSVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAVINQEEALSRKLYPDscPPVSAGGSGSFIISDSS 322 ***************************************************************************65446677*********** PP XXXXXXXXXXX.XXXXXXXXXX...............................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXX CS EIN3 281 kedvegkkeskikhvqavktta...............................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelif 343 ++dveg ++ + +v++ k ++ + ++++krk++ ++s ++++++ +tc+ q+++ +++l+f Ciclev10000607m 323 DYDVEGVEDDRNVEVEEIKPRDvnlfnmgamgrdrlmmtppmvpqikgelvetNSDFIQKRKQPADQSHLMMDQKI-YTCEFPQCPYGDYRLGF 415 *****777777688999999999***************************************99999999999986.***************** PP XXXXXXXXXX CS EIN3 344 adknsisqne 353 +++s+++++ Ciclev10000607m 416 LERSSRNNHQ 425 ********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.1E-131 | 47 | 294 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 4.0E-75 | 168 | 304 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.44E-60 | 173 | 297 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 618 aa Download sequence Send to blast |
MGIFEEMGFC GNLEFFSSPH GEGEAFLEHE QETAAEEDYS DEEMDVDELE RRMWRDRMLL 60 KKLKEQSKSK ECVDSAKQRQ SQEQARRKKM SRAQDGILKY MLKMMEVCKA QGFVYGIIPE 120 KGKPVSGASD NLRAWWKEKV RFDRNGPAAI AKYQADHAIL GKNEDCGSVV STPHSLQELQ 180 DTTLGSLLSA LMQHCDPPQR RFPLEKGVAP PWWPNGNEEW WPQLGLPKDL GPPPYKKPHD 240 LKKAWKVSVL TAVIKHMFPD IAKIRKLVRQ SKCLQDKMTA KESATWLAVI NQEEALSRKL 300 YPDSCPPVSA GGSGSFIISD SSDYDVEGVE DDRNVEVEEI KPRDVNLFNM GAMGRDRLMM 360 TPPMVPQIKG ELVETNSDFI QKRKQPADQS HLMMDQKIYT CEFPQCPYGD YRLGFLERSS 420 RNNHQLNCPY RHNSSQGFGM PNFQVNNDQT VAFSRPFAQP TQPKPATPPK NQTQSQFNIS 480 GLELPDDGQK MITDLMSFYD TNHQQNKSLN SGNLNAIGDQ NQQQEQRKFQ LQMDDSFYSQ 540 GAVMGRNMPG QSNMPMNNSV FSSAEIRFDQ CKAFDSPYDA NPSDSIADFR FNSPFNMASV 600 DYAMDSIPKQ DVSLWYL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-84 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-84 | 171 | 304 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006432537.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | V4SDU1 | 0.0 | V4SDU1_9ROSI; Uncharacterized protein | ||||
STRING | XP_006471293.1 | 0.0 | (Citrus sinensis) | ||||
STRING | XP_006432536.1 | 0.0 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27050.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 1 |
Link Out ? help Back to Top | |
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Phytozome | Ciclev10000607m |
Entrez Gene | 18040526 |