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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cc06_g00780 |
Common Name | GSCOC_T00023278001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
ERF |
Protein Properties |
Length: 536aa MW: 58704.9 Da PI: 4.5295 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc06_g00780 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 52.3 | 1.4e-16 | 86 | 144 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ng.....krkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr++ +g+WvAeIr+p++ + kr r +lg+f ta eAa +++a+++++g
Cc06_g00780 86 NFRGVRQRT-WGKWVAEIREPVSfSKtqvlsKRGRLWLGTFPTAVEAALKYDEAARAMYG 144
69****999.**********8887667898777************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 536 aa
Download sequence Send
to blast |
MACGGNRNNN NSRRRRTSVE SESVDDILLK WKNLNRQILE TVGVVGDDEV GGDELFRRKK 60 KRKVLPRGSR KGCMRGKGGP ENSRCNFRGV RQRTWGKWVA EIREPVSFSK TQVLSKRGRL 120 WLGTFPTAVE AALKYDEAAR AMYGPDAILN FPENCAPPTP PPSSLHHHSS TISDNNDSST 180 PDSAASSTSV DPVLVPPDGS CIAKGVLEIE IDNHADKSNG YLVRTRTVES PAETSGLSGV 240 TVVQESKIES DATHYAPTPS PTKLRCCKMD GGEPSYSRIK VEQPPENQVH SQVVSQINED 300 SVIRHAAEAE TRFPIDDPVG AADLDELVLL DEQQKLGNPG MPDDNGFWRN ILHGQSLDID 360 SSECISSLDD DMRLATGDWA ANLDDNLPVG CAASGAISLQ EDSTWLENIN KMLMEDTDSL 420 NFLDLLDPKP QGGYRDETFR VRGRGCQEPG TGRFELQNIQ PPATMADDFP GSSGAVNASD 480 TGLRNEVDGD LGQYRSSDED QGQYWLQHQD AKLNVENLQA IILDDNLNVD VLDLY*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 56 | 61 | RRKKKR |
2 | 56 | 62 | RRKKKRK |
3 | 58 | 63 | KKKRKV |