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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Cc05_g10900 |
| Common Name | GSCOC_T00021384001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
BES1 |
| Protein Properties |
Length: 328aa MW: 35124.2 Da PI: 9.1068 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc05_g10900 | genome | CGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 208.6 | 1.7e-64 | 2 | 144 | 1 | 149 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98
++++r ptwkErEnnkrRERrRRaiaa i+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg++p ++++++g s+sasp+ss++
Cc05_g10900 2 TSGTRLPTWKERENNKRRERRRRAIAANIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCRPVDRMDIMGGSTSASPCSSYH--- 96
5899*******************************************************************************************... PP
DUF822 99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
+sp +sy++sp+sssfpsp+s+ + + + +sl+p+l++ls++sss
Cc05_g10900 97 -----PSPGTSYNPSPASSSFPSPASSPYAANINGdgNSLIPWLKNLSSSSSS 144
.....*******************9987665544456**********997776 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAANI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG 60
WTVEPDGTTY RKGCRPVDRM DIMGGSTSAS PCSSYHPSPG TSYNPSPASS SFPSPASSPY 120
AANINGDGNS LIPWLKNLSS SSSSTSSTKF QLLCHGGSIS APVTPPLSSP TARTPRLKTD 180
WDDSSARASW GSHSSFLPLS TPPSPGRQAP PDSEWFAGMQ IPQGGPTSPT FSLVSANPFA 240
FKFESLRHTG SHMCTPGQSG TCSPAIPAGS DVPMAEVISD EFAFRSIKGG LVKPWEGERI 300
HEDCGSDDLE LTLGSSKTRR ANKRAVL*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 5e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 5e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 5e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 5e-22 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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