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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cc03_g02110 |
Common Name | GSCOC_T00025846001 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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Family |
ERF |
Protein Properties |
Length: 338aa MW: 37200.6 Da PI: 4.9306 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cc03_g02110 | genome | CGSC | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56 | 9.8e-18 | 50 | 98 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr+++ +gr++AeIrdp++ + r++lg+f+ta+eAa a+++a+++++g
Cc03_g02110 50 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 98
56******.**********965...5************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010102 | Biological Process | lateral root morphogenesis |
GO:0010432 | Biological Process | bract development |
GO:0010451 | Biological Process | floral meristem growth |
GO:0010582 | Biological Process | floral meristem determinacy |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 338 aa
Download sequence Send
to blast |
MSTSKTPEKP FNLYEPILTQ TGFTLLQRNT SVSQPSEKRG RRKQAEPGRF LGVRRRPWGR 60 YAAEIRDPTT KERHWLGTFD TAQEAALAYD RAALSMKGTQ ARTNFVYSDN TNFHSLISPF 120 DLQSVLQPSH LLTKNQNKQH DATKHTSSSS QAREHPISSD NDACSQSSYG SSPSENFFFS 180 SGSETNSGYL DCIVPDNCLK PPSHHKEYSN NSNADQTSVD QSNYSNLRVL ENQSHSDADV 240 TNVLPVDSTN PGNFSCYEGL NFGFLENEQS WEMNSCELSA VINNPLMGET GCMEGYDPTV 300 DNTSLESMAA ATSSAGFSSV FPPFAFGDVV DSGYPPF*
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