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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Cc00_g21560 |
| Common Name | GSCOC_T00000840001 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea
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| Family |
WRKY |
| Protein Properties |
Length: 535aa MW: 57515.9 Da PI: 7.6871 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Cc00_g21560 | genome | CGSC | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97 | 1.2e-30 | 179 | 238 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
Cc00_g21560 179 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApNCPVRKQVQRCAEDMSILITTYEGTHNHP 238
58***************************99****************************7 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 535 aa
Download sequence Send
to blast |
MGEVMEENQR LRMCLDRAMK DYRALQMQFN DMVQQEPNKS AEPNKSSSTI TTHQETEEPE 60
LVSLSLGMSS SDGKKDDHFS GKNQGKEKVD KDGDHDKKVL ALGLDCKFEL PKDQENEPSP 120
NPSLEASSGE VKEEEGGEKW PPQKSLKNVV RSEEDEVSQQ NPAKRARVSV RVRCDTPTMN 180
DGCQWRKYGQ KIAKGNPCPR AYYRCTVAPN CPVRKQVQRC AEDMSILITT YEGTHNHPLP 240
VAATAMASTT SAAASMLMSG STTSTSGLLP PSNFASANLN GLNFFLSDNS KPKPFYLPNS 300
SLSSSPSFPT ITLDLTTSSN ASSNLTKLGS FPPRSYSATR DLNFSSLESN ALPLSWSNGV 360
LSYGPQAQPY NKNQSISSLN FGRQPQETLY QSYSQKNHPI LNSSAQQSLP AETIAAATKA 420
ITSDPSFQSA LAAALTSIIG SGTGGTTGAP VSQTSADKSG QNLKLNDQSF PILSSFPSST 480
STVNKCAPTF LNSSKPPSSA NSQPGSLMFL SPSLSFPTPS NKSTSPGDNR DRIS*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator involved in the transcriptional regulation of terpene biosynthesis in glandular trichomes (PubMed:24884371). Binds to the promoter of the linalool synthase TPS5 and promotes TPS5 gene transactivation (PubMed:24884371). In association with WRKY72B, contributes to basal defense against root-knot nematodes (RKNs) and potato aphids, as well as Mi-1-mediated gene-for-gene resistance to these pests (PubMed:20409007). Both WRKY72A and WRKY72B are not required for gene-for-gene resistance mediated by Pto, another tomato R gene (PubMed:20409007). {ECO:0000269|PubMed:20409007, ECO:0000269|PubMed:24884371}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the root-knot nematode (RKN) Meloidogyne incognita and potato aphids. {ECO:0000269|PubMed:20409007}. |
