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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Cagra.2231s0026.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Family |
MYB |
Protein Properties |
Length: 290aa MW: 33427.4 Da PI: 5.9241 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.2231s0026.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 48.1 | 2.8e-15 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT eEd ll +++ G g+W++ a+ g++Rt+k+c++rw++yl
Cagra.2231s0026.1.p 21 KGPWTLEEDTLLNNYISHNGEGRWNLLAKSSGLKRTGKSCRLRWLNYL 68
79********************************************97 PP
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2 | Myb_DNA-binding | 52.4 | 1.2e-16 | 74 | 117 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
Cagra.2231s0026.1.p 74 RGNLTPQEQLLILELHSKWGNR-WSKIAKYLP-GRTDNDIKNYWRT 117
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 290 aa
Download sequence Send
to blast |
MSNILKKRCN NGEEEGVEQR KGPWTLEEDT LLNNYISHNG EGRWNLLAKS SGLKRTGKSC 60 RLRWLNYLKP DIKRGNLTPQ EQLLILELHS KWGNRWSKIA KYLPGRTDND IKNYWRTRVQ 120 KQARQLNIDS NSHKFLEVVR SFWVPRLIHK MEDNSNTNSK ATPPDLLGPV LQDNSFPHDF 180 SNIDFSTSMS VDLKKTSQFM VMESSSDLET TCSLYLDGSR GSSSQCVSEG YSSFPCLEEE 240 YMVATMGSSD ILQLQDCHVA DSTYEEDVTQ DPMWNMDDIW QFKEYAHYN*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription repressor of phosphate (Pi) starvation-induced genes. Regulates negatively Pi starvation responses via the repression of gibberellic acid (GA) biosynthesis and signaling. Modulates root architecture, phosphatase activity, and Pi uptake and accumulation. {ECO:0000269|PubMed:19529828}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Slightly induced by salicylic acid (PubMed:16463103). Induced reversibly in response to phosphate (Pi) deficiency but repressed in the presence of Pi, specifically in the leaves. Availability of Pi increases with decreased levels (PubMed:19529828). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:19529828}. |