 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Cagra.1995s0004.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
|
Family |
Nin-like |
Protein Properties |
Length: 420aa MW: 47390.6 Da PI: 4.6315 |
Description |
Nin-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Cagra.1995s0004.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | RWP-RK | 78.1 | 9.8e-25 | 327 | 377 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
+k+++l+d+ + F+lpi+ AAk++++c+TvLK+iCR+ ++RWPhRkiksl
Cagra.1995s0004.1.p 327 TKKLTLKDITMLFHLPIETAAKQMNICPTVLKKICRKGSLMRWPHRKIKSL 377
79***********************************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 420 aa
Download sequence Send
to blast |
PSSLVDDQGE DLYNDPFDGF GQFMEEDFSN VMADPNPNLM DLSFLENSLP PVFSTLPIVD 60 VDETKLLHEH ELSVADYDTA NNDFSFADGG YNISWDMFEP SNGDDLNDNI NNDVLGEIGN 120 NNVGEITRLE ESTRVFDDAN GPDFENGGTS TMHVLGPTIS DEMLVCTCCK MLRELVHFKE 180 GEMNTLEIFG EIGFFCHAIS MTQRFDSEST ERQSQTFHLK DLTMEEVKRF IEDYCSQRVA 240 SGLSLVQDTN AAFYQAMSAN SIFNQLPPML TLPSYTDVPV SLVSPDEALD VTPVPLHAVP 300 REEPTSSGVR KERKRRKTPL ATQRERTKKL TLKDITMLFH LPIETAAKQM NICPTVLKKI 360 CRKGSLMRWP HRKIKSLQTK IMSLKKLHTA AKDERTEAEI ERLQRRIDKI CSDALKNMK*
|