PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG032186.1
Organism
Populus euphratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 410aa    MW: 45071.7 Da    PI: 6.6607
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG032186.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.3e-1855104255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  CCG032186.1  55 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDYAALAMRG 104
                  69*******.**********93....35999**********************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008477.6E-1255104IPR001471AP2/ERF domain
PROSITE profilePS5103222.70855112IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.5E-2955111IPR001471AP2/ERF domain
SMARTSM003801.6E-3355118IPR001471AP2/ERF domain
CDDcd000181.89E-3055111No hitNo description
SuperFamilySSF541712.55E-2155112IPR016177DNA-binding domain
PRINTSPR003672.4E-95667IPR001471AP2/ERF domain
PRINTSPR003672.4E-97894IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 410 aa     Download sequence    Send to blast
MEEALRRLDG IPSHTLETIL HEPIIADLQN KSAPTNTAST TTNKRSLKES GGSLRYRGVR  60
RRPWGRYAAE IRDPQSKERR WLGTFDTAEE AACAYDYAAL AMRGLKARTN FVYPDAHSAT  120
VDPSHNLLPP FTFSESSHQP SRHYTKSSSN CSFLGHPHVG DFSAGGSPPH RSSDSVAGTS  180
LNMLFLRDFI HYPSGSSSHN HPQPFSDHSP CINGSSNSDP SNFSGGYFVN PSINTISSSF  240
NISLADSTVT TLPHMEFHQN YSTPGDLKRP DAKAEELEFF PQEPSDSGLL QEIIQGFFPK  300
HSSDKIASSE SSGESIAAPT SEIVSVNQSL DGSRTGMKKY FVKNEHHDPY LGHQGIRSGQ  360
IIGGCYRGVS SHELPHCNEM PLINHQMGPD SILDDIFQYP DRMSASAARF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-19551111471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX1171660.0JX117166.1 Populus angustifolia isolate SC4F clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1171670.0JX117167.1 Populus angustifolia isolate SC4F clone b ERF61 (ERF61) gene, complete cds.
GenBankJX1171700.0JX117170.1 Populus angustifolia isolate UC17F clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1171710.0JX117171.1 Populus angustifolia isolate UC17F clone b ERF61 (ERF61) gene, complete cds.
GenBankJX1171720.0JX117172.1 Populus angustifolia isolate UC19M clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1171760.0JX117176.1 Populus angustifolia isolate UTBR11 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172170.0JX117217.1 Populus angustifolia isolate UTOC14 clone b ERF61 (ERF61) gene, complete cds.
GenBankJX1172180.0JX117218.1 Populus angustifolia isolate UTOC16 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172210.0JX117221.1 Populus angustifolia isolate UTOC18 clone b ERF61 (ERF61) gene, complete cds.
GenBankJX1172220.0JX117222.1 Populus angustifolia isolate UTOC1 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172260.0JX117226.1 Populus angustifolia isolate UTOC29 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172280.0JX117228.1 Populus angustifolia isolate UTOC30 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172340.0JX117234.1 Populus angustifolia isolate WYSR51 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172360.0JX117236.1 Populus angustifolia isolate WYSR57 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172370.0JX117237.1 Populus angustifolia isolate WYSR57 clone b ERF61 (ERF61) gene, complete cds.
GenBankJX1172380.0JX117238.1 Populus angustifolia isolate WYSR62 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172400.0JX117240.1 Populus angustifolia isolate WYSR77 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172440.0JX117244.1 Populus angustifolia isolate WYSR83 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172500.0JX117250.1 Populus angustifolia isolate WYSR93 clone a ERF61 (ERF61) gene, complete cds.
GenBankJX1172510.0JX117251.1 Populus angustifolia isolate WYSR93 clone b ERF61 (ERF61) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011034073.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLR4IRN10.0R4IRN1_9ROSI; ERF61
STRINGPOPTR_0008s19030.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41003256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.15e-14DORNROSCHEN-like