 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
CA11g14610 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
| Family |
MYB |
| Protein Properties |
Length: 248aa MW: 28424.5 Da PI: 6.6197 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CA11g14610 | genome | PEP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.3 | 2.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g WT+eEd +l+ +++++G+ +W+ +++ g+ R++k+c++rw++yl
CA11g14610 14 KGTWTPEEDRKLAAYITEYGPWNWRQLPKYAGLERCGKSCRLRWLNYL 61
799*****************88************************97 PP
|
| 2 | Myb_DNA-binding | 60.7 | 3.1e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T+eEde+++++++qlG++ W++Ia++++ gR+++++k++w++
CA11g14610 67 RGNYTEEEDEIILNLHAQLGNK-WSAIAAHLP-GRSDNEIKNHWHT 110
899*******************.*********.***********97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 248 aa
Download sequence Send
to blast |
MVRTPCCDEN GRKKGTWTPE EDRKLAAYIT EYGPWNWRQL PKYAGLERCG KSCRLRWLNY 60
LRPNVKRGNY TEEEDEIILN LHAQLGNKWS AIAAHLPGRS DNEIKNHWHT ALKKRANNSG 120
ESSKKCNSKN NIRRSTTVAN KNASPSTSHE NIVLESSQWS PKESSSEDFF SYSNTDYQEQ 180
HKVFQQEALD EITSGSFWTE PFLVESFNTT GTDFLAPPID YCGLVCPPSP FIGHEFLSSF 240
DFDYFNY*
|
| Functional Description ? help
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| Source |
Description |
| UniProt | Functions as a repressor of epidermal cell outgrowth and negatively regulate trichome branch formation (PubMed:18805951, PubMed:21070410). Acts as both a positive and negative regulator of cellular outgrowth. Promotes both trichome expansion and branch formation (PubMed:21070410). Coordinately with WIN1/SHN1, participates in the regulation of cuticle biosynthesis and wax accumulation in reproductive organs and trichomes. Functions in cuticle nanoridge formation in petals and stamens, and in morphogenesis of petal conical cells and trichomes (PubMed:23709630). May play a role in the regulation of cuticle formation in vegetative organs (PubMed:24169067). {ECO:0000269|PubMed:18805951, ECO:0000269|PubMed:21070410, ECO:0000269|PubMed:23709630, ECO:0000269|PubMed:24169067}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975519 | 9e-43 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |
