PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA11g01130
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 348aa    MW: 37877.1 Da    PI: 5.4138
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA11g01130genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.68.2e-10442850
         AP2  8 wdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaar 50
                 +k +gr++ eIrd +     + kr++lg+f taeeA + +   +
  CA11g01130  4 KRK-SGRFATEIRDpF-----SkKRIWLGTFNTAEEASEVYQSKK 42
                455.8*********66.....44**************99886655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103214.183156IPR001471AP2/ERF domain
CDDcd000181.42E-13238No hitNo description
SuperFamilySSF541712.48E-9346IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.5E-13347IPR001471AP2/ERF domain
SMARTSM003802.0E-5352IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    Send to blast
MGRKRKSGRF ATEIRDPFSK KRIWLGTFNT AEEASEVYQS KKLEFQEKLN KAKNANKKKA  60
IPAKCELGLS SSDPPLMADA QTSDSSNELG DQFNKAKNAK DRKAISAKLG LGSSSDPPLM  120
IDSQTSDTLK EFVEQLKKAK SAKCKKAISA KFGLGCSSSD PPLMVHSLNS DTSNLFDDRS  180
KNTVNAKEEK AISAKFGLEF CSSDSQTSDS SNELDDRSKK AENAIVKKAI SAKFGLEFCS  240
SDTQTSDSSN ELDDRSKNAE NAIVKEAISA KFELGNSSSD PSSTVDSQTS DSSNDQESEE  300
ELWMGQWIRI SGDKEVKFSQ KLGVPVVDNY GFLLGEFSKL DDLSISL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016548599.10.0PREDICTED: dentin sialophosphoprotein-like
TrEMBLA0A2G2YCW80.0A0A2G2YCW8_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000377608e-65(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1553156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.11e-13ERF domain protein 11