PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA07g03280
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ARR-B
Protein Properties Length: 272aa    MW: 30828.1 Da    PI: 6.1795
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA07g03280genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like58.11.9e-18212266153
     G2-like   1 kprlrWtpeLHerFveaveqLGG..sekAtPktilelmkvkgLtlehvkSHLQkY 53 
                 k+r+rWt+eLH++F++a  qL     +k +Pk+ile+m+ + +t+e+v+SHLQ Y
  CA07g03280 212 KNRMRWTKELHKKFMDAYYQLEAdtFDKVVPKRILEIMNEPKVTREKVASHLQVY 266
                 78*******************652258**************************99 PP
2Response_reg76.59.6e-26301381109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl +dD+ + +++l ++l+k gy +v++++d++ ale+l++++  +D++++D+   ++dG++ll+ i  e  ++p+i+ +a++e ++++e +k Ga+
    CA07g03280  30 VLAIDDNVVCLKVLGSILQKCGY-IVTTTRDAKVALEILRKNKenFDIVITDVVRDDIDGFKLLEAIGLEM-DIPVIMTSANDERKTIVEGIKHGAS 124
                   7899*******************.***************888778**********************6654.8************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l+Kp+++e++ +
    CA07g03280 125 DYLVKPIKMEDVKN 138
                   *********99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.26E-3026143IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23003.3E-3326165No hitNo description
SMARTSM004482.0E-2428140IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011037.94929144IPR001789Signal transduction response regulator, receiver domain
PfamPF000722.2E-2130139IPR001789Signal transduction response regulator, receiver domain
CDDcd001563.25E-2331143No hitNo description
Gene3DG3DSA:1.10.10.609.0E-20209266IPR009057Homeodomain-like
SuperFamilySSF466899.86E-14210267IPR009057Homeodomain-like
TIGRFAMsTIGR015576.3E-18212266IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MSHSVTNECS NPPNLTKEKE TSKSPKGLKV LAIDDNVVCL KVLGSILQKC GYIVTTTRDA  60
KVALEILRKN KENFDIVITD VVRDDIDGFK LLEAIGLEMD IPVIMTSAND ERKTIVEGIK  120
HGASDYLVKP IKMEDVKNIF QHVTISINKN KATQDDHSST PISCNDTNEF GVQESSSSIL  180
PHKRISQQDN DDDEETNNDQ SSDESCPPRK KKNRMRWTKE LHKKFMDAYY QLEADTFDKV  240
VPKRILEIMN EPKVTREKVA SHLQVYLFLY I*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016578800.10.0PREDICTED: two-component response regulator ORR26-like
TrEMBLA0A2G2Z0D80.0A0A2G2Z0D8_CAPAN; Uncharacterized protein
STRINGXP_009764107.11e-119(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1548956
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-53response regulator 12