PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g86890 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ERF | ||||||||
Protein Properties | Length: 121aa MW: 13798.7 Da PI: 8.4632 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 31.4 | 4.7e-10 | 19 | 57 | 5 | 47 |
AP2 5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaai 47 GVr +k +g++ AeI++p + +k ++lg+f tae+A k ++ CA00g86890 19 GVRKRK-NGKFCAEIKHPLN---KKMIWLGTFVTAEDASKNYE 57 9**999.8*********743...5***************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 12.629 | 16 | 76 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.31E-10 | 18 | 63 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 7.3E-14 | 19 | 58 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 5.34E-13 | 19 | 56 | No hit | No description |
SMART | SM00380 | 1.8E-4 | 19 | 65 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 121 aa Download sequence Send to blast |
MNSYKRISKN SCVRLYPIGV RKRKNGKFCA EIKHPLNKKM IWLGTFVTAE DASKNYEFKK 60 HKFEELVMAK RAKNGQISEK YDQESCVADE FEEKSSMSVA ENTNTSNGVE ESDEELMMGT 120 * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015161600.1 | 2e-48 | PREDICTED: ethylene-responsive transcription factor ERF119-like | ||||
TrEMBL | A0A2G2V6C6 | 1e-67 | A0A2G2V6C6_CAPBA; Ethylene-responsive transcription factor | ||||
STRING | PGSC0003DMT400094230 | 8e-48 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA5075 | 15 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68550.2 | 3e-14 | ERF family protein |