PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g52210
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 323aa    MW: 35732.2 Da    PI: 6.7848
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g52210genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.51.2e-13100146555
                 HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 h   Er RR+r+++ fe L++llP++    + K +K++i+ ++v+YIk+L+
  CA00g52210 100 HIRTERERRKRMRNMFEDLQTLLPHL----QSKADKSSIVDETVRYIKMLE 146
                 7889*********************9....79****************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-1593157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.76795145IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-1398157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.3E-11100146IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.18E-12100149No hitNo description
SMARTSM003534.4E-10101151IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550216.11E-5238297No hitNo description
Gene3DG3DSA:3.30.70.2605.1E-4239290No hitNo description
PROSITE profilePS516718.52242309IPR002912ACT domain
CDDcd048736.34E-6243286No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MNEGGENDCL IWENNEVWSF LNSDNGQLVG SGVEFVGDKL PDPNRSNTCQ SLAAVKEVGE  60
ASLGGKKRCR SNEKKGTNES GEPKSRANGD GSRESGHELH IRTERERRKR MRNMFEDLQT  120
LLPHLQSKAD KSSIVDETVR YIKMLENTVD NLKEQKLERI QLGIAKLSTM NNPVMTPQKL  180
RVGTSWEQFL ADKGSASNSA AITPKNNNNV TGIPLLNTNV PTDFETWSSD NVVLNVCGEE  240
AHISVCCPKK PGLFTFICHV LEKNKIDIVH AHVSSNQFRN LFMIQTHARG ASGLEQLISG  300
DLSVEDMYKQ AAHEIMSGIN PK*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016582367.10.0PREDICTED: transcription factor bHLH95-like
TrEMBLA0A1U8HG200.0A0A1U8HG20_CAPAN; Uncharacterized protein
TrEMBLA0A2G2XYR80.0A0A2G2XYR8_CAPAN; transcription factor bHLH95-like
STRINGPGSC0003DMT4000662591e-106(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13242369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-37bHLH family protein