PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g29950 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | Nin-like | ||||||||
Protein Properties | Length: 181aa MW: 20811.6 Da PI: 8.3793 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 53.3 | 5.2e-17 | 94 | 142 | 4 | 52 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 i+ e l+++F + +dAAk+L v++ + KriCR+y+I+RWPh k +++ CA00g29950 94 GITREILEEHFGMCPQDAAKSLRVSVPTFKRICREYNISRWPHHKTRKV 142 589999***************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 12.457 | 79 | 164 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 5.0E-17 | 95 | 142 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 181 aa Download sequence Send to blast |
MWMKHMITLK LKRTPVKLCN LSHFEQENVE TDYTCSARSN DKVEHSDIAR CGRQSVEAES 60 INGESNWVSR ETTNILRIDS QKNSSKQRIL KDYGITREIL EEHFGMCPQD AAKSLRVSVP 120 TFKRICREYN ISRWPHHKTR KVYPHVSQGI SLHGVEPYEG DQQCPNLSQE KGTQIDLVVV 180 * |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016570904.1 | 1e-134 | PREDICTED: protein NLP2-like | ||||
Refseq | XP_016570905.1 | 1e-134 | PREDICTED: protein NLP2-like | ||||
TrEMBL | A0A1U8GID2 | 1e-133 | A0A1U8GID2_CAPAN; protein NLP2-like | ||||
STRING | XP_009603064.1 | 6e-47 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10406 | 5 | 15 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G64530.1 | 9e-11 | Nin-like family protein |