PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_45197 | ||||||||
Common Name | KK1_042423 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | ARR-B | ||||||||
Protein Properties | Length: 627aa MW: 69240.8 Da PI: 6.6271 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 79.8 | 3.3e-25 | 198 | 249 | 1 | 53 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 kpr++W+ eLH++Fv+av+qL G+ekA+Pk+il+lm+v+ Lt+e+v+SHLQ + C.cajan_45197 198 KPRVVWSVELHRKFVSAVNQL-GIEKAVPKKILDLMNVEKLTRENVASHLQAF 249 79*******************.*****************************87 PP | |||||||
2 | Response_reg | 78.7 | 2e-26 | 14 | 120 | 1 | 107 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 vl vdD+p+ +++l+++l+k +y +v++++++ al+ll+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++ +g+++++ + + Ga C.cajan_45197 14 VLAVDDDPTCLKVLETLLRKCQY-HVTSTKNAITALKLLRENKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGDPKMVMKGITHGA 107 799********************.***************888888*******************87754.558*********************** PP SEEEESS--HHHH CS Response_reg 95 kdflsKpfdpeel 107 d+l Kp+ +eel C.cajan_45197 108 CDYLLKPVRIEEL 120 ***********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PIRSF | PIRSF036392 | 6.4E-160 | 1 | 623 | IPR017053 | Response regulator B-type, plant |
SuperFamily | SSF52172 | 2.7E-35 | 11 | 136 | IPR011006 | CheY-like superfamily |
Gene3D | G3DSA:3.40.50.2300 | 2.6E-42 | 11 | 146 | No hit | No description |
SMART | SM00448 | 1.4E-31 | 12 | 124 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 42.647 | 13 | 128 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 6.8E-24 | 14 | 121 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 1.30E-26 | 15 | 128 | No hit | No description |
PROSITE profile | PS51294 | 9.909 | 195 | 254 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 8.24E-16 | 195 | 249 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 7.0E-25 | 196 | 249 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.6E-22 | 198 | 249 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 627 aa Download sequence Send to blast |
MDDLRDQFPI GMRVLAVDDD PTCLKVLETL LRKCQYHVTS TKNAITALKL LRENKNKFDL 60 VISDVHMPDM DGFKLLELVG LEMDLPVIML SVNGDPKMVM KGITHGACDY LLKPVRIEEL 120 QIIWQHVIRR KKTDPKEQNK TSNQEKPDAD CCNGRESAAT GNSDQSGKSS KRRKDEDEDE 180 HEDHENSHDN EDPSTQKKPR VVWSVELHRK FVSAVNQLGI EKAVPKKILD LMNVEKLTRE 240 NVASHLQAFS HPFFFSLMLY LKRISRVANQ QANMVAALGT ADSSYSRMGS LSGLRPLQTF 300 SGPQQFHNNA FRPFPPGGMT GRFSTSVGLN VHGLPSSENL KLGHAQNLNN SMNDPLKFQS 360 SQIGGNHNGI QGMPTFLGLD QLQHNKGVSV GPVQNLSPII DAKSTFPMPN NALTKDTQGS 420 GAYQNLTQLA SQNSQFSIPL MDQGRCSDIW ASPVQSPGTN SYPPSDVNLS GASSITSMSN 480 QSHDSLTDMP SQGVFLTNNS GLMSNNVPLQ GWDNHNHDTS YHSNAIGNTI DSLISVNPVD 540 TEGHTTVNST FNRDLGFNFC DQFQMKPDGV MGLSGETSLK AHQGYIMNQQ KSQNSCATNI 600 NVGSLEYFVN SMMTQVIKFI QFDAVSQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 9e-23 | 194 | 249 | 1 | 56 | ARR10-B |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_45197 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC236221 | 1e-129 | AC236221.2 Glycine max clone GM_WBc0105L07, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020205567.1 | 0.0 | two-component response regulator ARR12 | ||||
Swissprot | Q6K8X6 | 1e-134 | ORR23_ORYSJ; Two-component response regulator ORR23 | ||||
TrEMBL | A0A151R1P6 | 0.0 | A0A151R1P6_CAJCA; Two-component response regulator | ||||
STRING | GLYMA17G33230.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF956 | 34 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-119 | response regulator 12 |
Publications ? help Back to Top | |||
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