PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_44432

Common Name

KK1_045263

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bHLH

Protein Properties

Length: 232aa MW: 25814.3 Da PI: 7.5986

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_44432	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	20.1	1.2e-06	83	128	7	54
HHHHHHHHHHHHH.HHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsa.feeLrellPkaskapskKlsKaeiLekAveYIksL 54 rE+ RRd++N++ f eL ++l + + +K +K++iL A + + +L C.cajan_44432 83 GREKLRRDKLNERqFLELSSILEPG---RLPKTDKVAILSDAARVVIQL 128 69*******9758*****8...89**********9887766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00353	7.7E-5	82	134	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.5E-8	84	141	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.06E-5	84	133	No hit	No description
SuperFamily	SSF47459	1.26E-8	84	153	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:1.20.5.170	2.6E-4	142	175	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence Send to blast
MEMNSSGGAS GWLYDYSFDI SVAGADFMAA DSAGFSWGPQ SQTFKGPSNM SLEMEYSLDS 60 TVLENGPSKR LRTESCASGS KAGREKLRRD KLNERQFLEL SSILEPGRLP KTDKVAILSD 120 AARVVIQLRN EAERVKEMND ELQAKVKELK AEKNELRDEK NRLKEEKEKL EQQVKLTNVH 180 PSILPQTATA KGQVGGHKLI PFIGYPGYAM WQFMPPAALD TSKDHLLRPP VA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_44432

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT097126	0.0	BT097126.1 Soybean clone JCVI-FLGm-15N2 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020207468.1	1e-169	transcription factor bHLH115 isoform X1
Swissprot	Q9C682	1e-70	BH115_ARATH; Transcription factor bHLH115
TrEMBL	A0A151QUA0	1e-171	A0A151QUA0_CAJCA; Transcription factor bHLH115 family
STRING	GLYMA13G38140.1	1e-145	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14916	12	14

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G51070.1	4e-59	bHLH family protein

Publications ? help Back to Top
Liang G,Zhang H,Li X,Ai Q,Yu D bHLH transcription factor bHLH115 regulates iron homeostasis in Arabidopsis thaliana. J. Exp. Bot., 2017. 68(7): p. 1743-1755 [PMID:28369511]