PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_44345
Common NameKK1_044036
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 273aa    MW: 30754.9 Da    PI: 8.6612
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_44345genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.34.2e-30127184258
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58 
                     Dgy+WrKYGqK+ ++++ pr+Y+rC++a +Cpvkkkv+rs edp+++++tYegeHnh
  C.cajan_44345 127 MDGYQWRKYGQKVTRDNPSPRAYFRCSFApTCPVKKKVQRSIEDPTILVTTYEGEHNH 184
                    6***************************99**************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182904.71E-25125186IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.4E-28126185IPR003657WRKY domain
SMARTSM007741.3E-34126186IPR003657WRKY domain
PfamPF031061.1E-24128184IPR003657WRKY domain
PROSITE profilePS5081125.304128187IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MEPTTCLNLN LDPSKHMDDV LLQELRRLSC ENKRLTHILT QLCDNYMALQ NQLNQLINNT  60
DFEQDPIESR KRKLAHESCT IKFNAECSSI THKDFNSSPK VSKVLVKTEA SNNSLLNLIS  120
MVKFYVMDGY QWRKYGQKVT RDNPSPRAYF RCSFAPTCPV KKKVQRSIED PTILVTTYEG  180
EHNHGRQQAE ISLVSKQSEN ETPKAKGSSP VSSPTTTPTV TLDLVNSGLV ENGQKSSIQQ  240
FLVQQMATSL TRDPNFTTAL ATAISGKILE AKW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-201261841471WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_44345
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150367e-53AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020206663.10.0probable WRKY transcription factor 40
TrEMBLA0A151QXI20.0A0A151QXI2_CAJCA; Putative WRKY transcription factor 40
STRINGXP_007161095.11e-144(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25000.12e-57WRKY DNA-binding protein 60