PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_39178
Common NameKK1_036626
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 511aa    MW: 58555.9 Da    PI: 6.2462
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_39178genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.25.2e-29116201187
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                    rW++qe+l L+e+r+++++++r++++k+plW e+s+ m +e g++rs k+Ckek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  C.cajan_39178 116 RWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMaEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASR--QDGKHYRFFRQLEA 201
                    8*************************************7778*****************************8..55667*******85 PP
2trihelix45.12.6e-14424490166
       trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                    rW++ e+  Li++r+  e+r+r+ g l+ +lW+e+++k++  g+ rs+ +Ck+ w++++   +++ e
  C.cajan_39178 424 RWSEMEISNLIQLRTGFEQRFREnGGLENGLWDEIAEKLACLGCDRSASECKQIWDEISISLRRTVE 490
                    8*********************8578********************************988888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.6113176IPR001005SANT/Myb domain
PROSITE profilePS500906.888115174IPR017877Myb-like domain
PfamPF138371.4E-19115202No hitNo description
CDDcd122034.49E-22115181No hitNo description
PROSITE profilePS500906.748417482IPR017877Myb-like domain
SMARTSM007170.43421484IPR001005SANT/Myb domain
CDDcd122031.50E-14423488No hitNo description
PfamPF138371.4E-9423491No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MADPYGLPED LRRLISSRTH LNPSNTTHLL EPLCLHHTLS AVTVTTPPNS YDPNMVGDVF  60
FPRPFTHFAH HDYSSTSALN PTTTATASDH ATATAAFCSI ETAEKGWFAF DSGNNRWPRQ  120
ETLSLLEIRS RLDSKFRENN QKAPLWNEIS RIMAEEFGYQ RSGKKCKEKF ENLYKYYKKT  180
KEGKASRQDG KHYRFFRQLE AICGDQSNTT HASPSDKTNR AGGNTASIQT PNLTINQDHN  240
GESSNNPKCS ESLSISNSSE LETSSSENND EDLSAIAFMM KQSRDEKQKG SDHRQSDHRR  300
VRRSWRAKVE EIVDSHMRKI LETQDAWMER MLSVVEQREQ EMASKEEERK RKESMWFDQQ  360
VHELWAKEKA WVESRDAALI EVVRKHIGVG VEALPFDEGI PNKNKSQGEH IDANEFASDH  420
GSSRWSEMEI SNLIQLRTGF EQRFRENGGL ENGLWDEIAE KLACLGCDRS ASECKQIWDE  480
ISISLRRTVE CDGVKRRPWY LGLKLTDDDD L
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_39178
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239847.10.0trihelix transcription factor PTL isoform X2
TrEMBLA0A151RHS60.0A0A151RHS6_CAJCA; Uncharacterized protein
STRINGXP_007143826.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.13e-77Trihelix family protein