PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37436
Common NameKK1_038275
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 431aa    MW: 47337.5 Da    PI: 7.7621
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37436genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.92.1e-28194252259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     Dg++WrKYGqK+ kg+++pr+YYrC++   Cpv+k+v+r+ +d++v+++ Yeg+Hnh+
  C.cajan_37436 194 GDGCQWRKYGQKTAKGNPCPRAYYRCSMGtACPVRKQVQRCFKDETVLITSYEGNHNHP 252
                    59**************************98****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.1E-30179254IPR003657WRKY domain
SuperFamilySSF1182908.63E-26187254IPR003657WRKY domain
PROSITE profilePS5081128.472188254IPR003657WRKY domain
SMARTSM007746.0E-32193253IPR003657WRKY domain
PfamPF031069.8E-25195252IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MEEKVVLKEL LQDEEPSNHS TIGSTLLSLS LNNSGPTITQ MSMLRIKLEE AKKENEILKA  60
TLNQVNEHCT ALKNRILFEI QQHQLSSSSP LNKNLDSQGN RKDEEKPMLH TRQFLNIGES  120
SLLDGNTEAR ASAENIEKKI LGRNVACDKY NGEGEIKSQT TSHEPKHTED QALEATCRRA  180
KVSIRARSDF SLIGDGCQWR KYGQKTAKGN PCPRAYYRCS MGTACPVRKQ VQRCFKDETV  240
LITSYEGNHN HPLPAAARPL ASSTSAALNM FLSGSITSNS HIIPIPNPHL FSASSPSNIS  300
PTAVATFSQS ATCPTVTLDL TQPHNNYMQF QRATTTPSFP LSLHGHPQVN SMLPITMLST  360
PEKNLDLVDV VSEAIAKDPS LKAALFSAIS SLTGEAQNMI DNQSQQSKSG YDPCSKMPAI  420
PPHQPYTTQL I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20180254174WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37436
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150356e-42AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020202307.10.0probable WRKY transcription factor 47 isoform X1
TrEMBLA0A151RD390.0A0A151RD39_CAJCA; Putative WRKY transcription factor 42
STRINGGLYMA09G09400.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139451122
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04450.15e-52WRKY family protein