PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_34282 | ||||||||
Common Name | KK1_034884 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | B3 | ||||||||
Protein Properties | Length: 140aa MW: 15978.3 Da PI: 8.2163 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.4 | 5.4e-13 | 57 | 111 | 43 | 96 |
S-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 43 grsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +sW++ ++ +s+r ++ t+GWk+F+ + Lk+gD ++F+l+++s+++ ++v C.cajan_34282 57 DKSWDLVYNG--QSNRqqkTFGTTGWKKFAVDTCLKVGDACIFELIQSSDKKIIFQV 111 59******55..4433335999************************98888766654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101936 | 3.73E-12 | 16 | 116 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 2.95E-10 | 17 | 115 | No hit | No description |
SMART | SM01019 | 0.0078 | 19 | 117 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 2.2E-11 | 40 | 117 | IPR015300 | DNA-binding pseudobarrel domain |
Pfam | PF02362 | 9.1E-11 | 57 | 111 | IPR003340 | B3 DNA binding domain |
PROSITE profile | PS50863 | 9.925 | 58 | 117 | IPR003340 | B3 DNA binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
PTTNLEWDEV KPLSGKPHYE HLLSRSNLSP RYNMGPSSNI LSELPSHEVP TILIYGDKSW 60 DLVYNGQSNR QQKTFGTTGW KKFAVDTCLK VGDACIFELI QSSDKKIIFQ VQILRSDIPS 120 KFLENEKLRG QIREMPIVLS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_34282 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020238352.1 | 1e-101 | B3 domain-containing protein Os04g0386900 | ||||
Refseq | XP_020238353.1 | 1e-101 | B3 domain-containing protein Os04g0386900 | ||||
TrEMBL | A0A151RM90 | 1e-99 | A0A151RM90_CAJCA; B3 domain-containing protein Os04g0386900 family (Fragment) | ||||
STRING | GLYMA07G35040.3 | 3e-61 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF9722 | 26 | 40 |