PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_30804
Common NameKK1_032369
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 342aa    MW: 39883.9 Da    PI: 6.0391
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_30804genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind109.13.3e-34511422102
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Fl+k+++ +ed+++++++sws+ g sfvv+d++ f++++Lp+yFkh+nf+SFvRQLn+YgF+k++ ++         weF+++ F +g+++ll +i
  C.cajan_30804  51 FLTKTFDAVEDPTTSHIVSWSRGGASFVVWDPHAFSRDLLPRYFKHNNFSSFVRQLNTYGFRKIDPDK---------WEFANEGFLRGHRHLLANI 137
                    9****************************************************************999.........******************* PP

                    XXXXX CS
   HSF_DNA-bind  98 krkks 102
                    +r+k+
  C.cajan_30804 138 RRRKH 142
                    **986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.107.5E-3847140IPR011991Winged helix-turn-helix DNA-binding domain
SuperFamilySSF467859.07E-3547140IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004153.3E-5947140IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004473.6E-3151140IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.0E-195174IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.0E-1989101IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS00434090114IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000566.0E-19102114IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MNYLYPVKEE YLESSPPSSL SLSTHGIVDE SGMAPAPRPM EGLHEIGPPP FLTKTFDAVE  60
DPTTSHIVSW SRGGASFVVW DPHAFSRDLL PRYFKHNNFS SFVRQLNTYG FRKIDPDKWE  120
FANEGFLRGH RHLLANIRRR KHPSQPCPSQ QAQGHCVEVG RFGLDEEVDR LKRDKQVLML  180
ELVRLRQQQQ NTKSYLEAME KRLRGTEIKQ QQMMAFLARA LKNPTFIQQL LQQKEKRKEL  240
EEAMSKKRRR PIEQGHKYGF EVSELELLAM EMQGYGRGRR EQEEEPEVFE SQERLEKELD  300
EGFWEEFFSE GFEGEFDIPQ GQDEEDVNVL ANRFGYLGSS PK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ldu_A3e-244914018120Heat shock factor protein 1
5d5u_B5e-244914027129Heat shock factor protein 1
5d5v_B5e-244914027129Heat shock factor protein 1
5d5v_D5e-244914027129Heat shock factor protein 1
5hdg_A3e-24491408110Heat shock factor protein 1
5hdn_A3e-24491408110Heat shock factor protein 1
5hdn_B3e-24491408110Heat shock factor protein 1
5hdn_C3e-24491408110Heat shock factor protein 1
5hdn_D3e-24491408110Heat shock factor protein 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235249KRKELEEAMSKKRRR
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_30804
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020236257.10.0heat stress transcription factor A-7a
SwissprotQ9LUH81e-124HFA6B_ARATH; Heat stress transcription factor A-6b
TrEMBLA0A151RU380.0A0A151RU38_CAJCA; Heat stress transcription factor A-6b
STRINGGLYMA19G34210.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF110034105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-102heat shock transcription factor A6B