PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29446
Common NameKK1_033401
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 267aa    MW: 29958.8 Da    PI: 10.2622
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29446genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.71.5e-1328114186
       trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    +W+++ + +Liea  e++ +l+rg    ++W+ev++++       +++ +r+ +qCk++++ l+k+yk +k++ ++   +s + +p+f++l+
  C.cajan_29446  28 CWSEEATFTLIEAWGERHLELSRG----KHWQEVADAVnarhghVSTKARRTDVQCKNRIDTLKKKYKIEKARVSDS-GDSATAWPFFRRLD 114
                    7********************999....9*********99888888899***********************99985.677779*****997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.4E-2426115No hitNo description
Gene3DG3DSA:1.10.10.609.5E-42989IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MDSTAGAPSL AAAPPSSRPS PFPGREDCWS EEATFTLIEA WGERHLELSR GKHWQEVADA  60
VNARHGHVST KARRTDVQCK NRIDTLKKKY KIEKARVSDS GDSATAWPFF RRLDFLIGDT  120
FPAKKSSPPA TSSDRRSTPP AKSPAWSLTP VLPRSGSQKP SPPSPESPED ENSNGLKSSS  180
GSEKGVMKKK RRRDCGELGY REVAEALVRF GEIYERVEEQ KQRQMVELEK QRMQFAKDLE  240
CQRLKLFMET QVQLQKINRS KRASATG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192KKKRRR
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29446
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237125.11e-170trihelix transcription factor ASIL2
SwissprotQ9LJG83e-32ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A151RRB40.0A0A151RRB4_CAJCA; Uncharacterized protein
STRINGGLYMA13G36650.11e-133(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.11e-45sequence-specific DNA binding transcription factors