PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_29425
Common NameKK1_029969
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 625aa    MW: 71412.1 Da    PI: 4.8588
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_29425genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM183.54.9e-5751321128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    lppGfrFhPtdeelv +yLk+k++g+k+el e+i+evd+yk+ePwdLp k  + +++ ewyfFs+rd+ky++g+r+nratksgyWkatgkd++v s
  C.cajan_29425   5 LPPGFRFHPTDEELVAYYLKRKINGRKIEL-EIIPEVDLYKCEPWDLPgKsLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNS 99 
                    79****************************.99***************6434445667************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++++vg+kktLv+y+grap+g++t+Wvmheyrl
  C.cajan_29425 100 -QTRAVGMKKTLVYYRGRAPHGSRTNWVMHEYRL 132
                    .9999***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.48E-653155IPR003441NAC domain
PROSITE profilePS5100562.2135155IPR003441NAC domain
PfamPF023659.5E-316132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MAPVLPPGFR FHPTDEELVA YYLKRKINGR KIELEIIPEV DLYKCEPWDL PGKSLLPGKD  60
LEWYFFSPRD RKYPNGSRTN RATKSGYWKA TGKDRKVNSQ TRAVGMKKTL VYYRGRAPHG  120
SRTNWVMHEY RLDERECETA SGLQDAYALC RVFKKTAVIT PKDGGHYVNV PIANQITSDH  180
SSSIELCSEG RGEDLDSSHY LMPMDNCSPH NMGNETSLTI NGGSRDHPKW SHFSSEDPLL  240
SLPTSSFHNF EGITYPPSRV DIALECARMQ HRFAMPPLEL DDIPQEILSV AHASQELINQ  300
SSYSQEWDCN DNYAPRSEED FTFMVGTNYN HLNEMRYVDK TWEDANTRTI EIGDVDEEFK  360
AERMVENLRW VGMSREDLEK MEEQKTVPIE DIPNFQTNRE ENEVQESEQH SNNEHNDTDI  420
NDFSLGFIND DDPNENFIED GNIDDYSSSP SFEVVEEIKV NHGMLVSTGQ VAETFFHQIV  480
PSQTLQVHLN SVVANDHCVE NAEAMLMIME NQGSLLRKFK SYVMGKLSKP SKAIASAVVF  540
VFALVLMHCA YLKEEVEIWN ETCCSMKRMS QSSEIIKWNE SNEVWFVGVK SEKGLSAVLK  600
KIGIFLTISL ALCTMWANHN MIANP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A3e-58515720170NAC domain-containing protein 19
3swm_B3e-58515720170NAC domain-containing protein 19
3swm_C3e-58515720170NAC domain-containing protein 19
3swm_D3e-58515720170NAC domain-containing protein 19
3swp_A3e-58515720170NAC domain-containing protein 19
3swp_B3e-58515720170NAC domain-containing protein 19
3swp_C3e-58515720170NAC domain-containing protein 19
3swp_D3e-58515720170NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_29425
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150364e-96AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234130.10.0NAC domain-containing protein 86 isoform X2
TrEMBLA0A151S0S30.0A0A151S0S3_CAJCA; NAC domain-containing protein 74
STRINGGLYMA14G39080.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44213460
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.11e-154NAC domain containing protein 28