PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_28045
Common NameKK1_029824
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bHLH
Protein Properties Length: 435aa    MW: 47274.5 Da    PI: 5.0732
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_28045genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH16.31.7e-053253621254
                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    R +++ +++  L++l+ +      +K + a++L +A++YIk L
  C.cajan_28045 325 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIDYIKFL 362
                    677888999*******998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.074313362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.23E-6323367No hitNo description
SuperFamilySSF474591.57E-11323380IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.4E-8327370IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 435 aa     Download sequence    Send to blast
MAEEFQAAIC GESWWNINPT RSVFPLMSST CSVAAADAGN YSTWQTDFVD FKGTTSILID  60
STLQMMGFGM SSSTSSNWNQ SLLGSAFHSV LQEETGMAGG SGSSNNSQIQ KDWSPKNFSS  120
GGGGSQVSTV NAFKPMNQDF SLDQQGLNSV VTSTGSLSGD FPIVSASYGY PSTLIQSLYE  180
PEPEPQPQPQ NSLFTNPSMS YSSTVNYGTC SNELSPTWSN VSSLLKPSMP KQQLSGLHFS  240
NNTTFWSASA EALNDIRAGV FASSQAQYQT PKFEEKPNCP NTLLNKLKRE ESPDTASAAK  300
KNSSEPAFKR QRIETPSPLP TFKVRKEKLG DRITALQQLV SPFGKTDTAS VLHEAIDYIK  360
FLHDQVSVLS NPYMKNGAPI QHQQDCDNLK ESEGPKQDLR SRGLCLVPIS STFPVANETN  420
VDFWTPTYGG ALIGR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_28045
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311200.0KT031120.1 Glycine max clone HN_CCL_146 bHLH transcription factor (Glyma13g32320.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234019.10.0transcription factor bHLH112 isoform X1
TrEMBLA0A151S0Y70.0A0A151S0Y7_CAJCA; Transcription factor bHLH112 family
STRINGXP_007148280.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF111833106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.12e-60bHLH family protein