PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_27542
Common NameKK1_031486
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 402aa    MW: 46366.4 Da    PI: 4.3985
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_27542genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.61.9e-14172256286
       trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                    Wt+qe+ +L++a  ++  + +r++l+   W+ev+k + +  ++er+ +qC+++++ l+k+ykk+k+   +  ++   +++yf++++
  C.cajan_27542 172 WTEQETFVLLDAWGDKFLQHGRKSLRCDEWQEVAKMVsQVSKIERTETQCRNRLDTLKKKYKKEKAKFPDS-DGGAFKWVYFKRMD 256
                    *************************************555789**************************95.777889*******8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.5E-20171258No hitNo description
Gene3DG3DSA:1.10.10.603.4E-4171236IPR009057Homeodomain-like
PROSITE profilePS500906.237172229IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MDGIEDDARY PPNPYRIITH HRGYGYQNSP YSPPVDAEYA QHDSDQNEER EKLEGEDEVY  60
QSNSLQIPQK DPDEEDGMDG GGDENHDDHY DYNHDDDDDD EEEEEEEEEE GENKQISYDA  120
TKIEDDLESH PKKQKLKSLI LAYELAPRVP APSEAPSVPK PSSGGRNSLT DWTEQETFVL  180
LDAWGDKFLQ HGRKSLRCDE WQEVAKMVSQ VSKIERTETQ CRNRLDTLKK KYKKEKAKFP  240
DSDGGAFKWV YFKRMDELMS SPPQQARLSC GLDSGEYVFM NPGVYLNHAN GLDEMRDSPE  300
NTESTGEEGS DGPQAKKRRK GRGSGEASSF RLLADSIQKI SKIYEKIENN KRQQMMELEK  360
MRMDFHRELE TQKRQILENL QCEISKLEQR NDQNDDSSEN GT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1314320AKKRRKG
2315319KKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_27542
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020235485.10.0trihelix transcription factor ASIL1
TrEMBLA0A151RWI70.0A0A151RWI7_CAJCA; Uncharacterized protein
STRINGGLYMA15G01730.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24413480
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.15e-64Trihelix family protein