PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_24391 | ||||||||
Common Name | KK1_024605 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | bHLH | ||||||||
Protein Properties | Length: 203aa MW: 22232.3 Da PI: 7.4191 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.4 | 3e-09 | 71 | 113 | 4 | 49 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAve 49 ++ rE+ RRdr+N++f eL +l + + K +Ka+iL Av+ C.cajan_24391 71 SKACREKLRRDRLNDKFVELGAILEPG---RPIKTDKAAILIDAVR 113 6789**********************8...7899**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 10.849 | 67 | 118 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 9.55E-10 | 69 | 137 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 3.62E-6 | 70 | 113 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 2.6E-9 | 71 | 142 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 6.0E-7 | 71 | 113 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.8E-4 | 73 | 126 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MVSRENTNWF FDYALIDDIP VPDAAFSAFT WPPNASNVGV EIDGSLGDSD GLKESGSKKR 60 VRSESCAASS SKACREKLRR DRLNDKFVEL GAILEPGRPI KTDKAAILID AVRMAEKNEL 120 RDEKQRLKAE KEKLEQQLKS LNAQPSFMPP PAAIPAAAFA AQGQAHGNKL VPFISYPGVA 180 MWQFMPPAAV DTSQDHVLRP PVA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Plays a role in resistance to amide-linked indole-3-acetic acid (IAA) conjugates such as IAA-Leu and IAA-Phe. May regulate gene expression in response to metal homeostasis changes. {ECO:0000269|PubMed:17028341}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_24391 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT098561 | 2e-95 | BT098561.1 Soybean clone JCVI-FLGm-12L19 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027910857.1 | 1e-129 | transcription factor ILR3-like | ||||
Swissprot | Q9FH37 | 2e-86 | ILR3_ARATH; Transcription factor ILR3 | ||||
TrEMBL | A0A151SFA4 | 1e-146 | A0A151SFA4_CAJCA; Transcription factor ILR3 | ||||
STRING | XP_004505433.1 | 1e-122 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1602 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-58 | bHLH family protein |