PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_19358
Common NameKK1_019922
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 544aa    MW: 61679.5 Da    PI: 5.64
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_19358genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like77.12.2e-24199252155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    k+r++W+ +LH++Fv+av+q+ G +k  Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  C.cajan_19358 199 KARVVWSVDLHQKFVKAVNQI-GFDKVGPKKILDLMNVPWLTRENVASHLQKYRL 252
                    68*******************.9*******************************8 PP
2Response_reg82.21.6e-27191271109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    vl+vdD+p+ +++l+++l+k +y ev+++  ++ al+ll+e++  +D+++ D++mp+mdG++ll+     e++lp+i+++  ge + + + ++ Ga
  C.cajan_19358  19 VLVVDDDPTWLKILEKMLKKCNY-EVTTCCLARHALNLLRERKdgYDIVISDVNMPDMDGFKLLELVGL-EMDLPVIMMSVDGETSRVMKGVQHGA 112
                    89*********************.***************999999*******************87754.558*********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+l Kp+ ++el++
  C.cajan_19358 113 CDYLLKPIRMKELRN 127
                    ************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521721.57E-3516149IPR011006CheY-like superfamily
Gene3DG3DSA:3.40.50.23001.3E-4316153No hitNo description
SMARTSM004481.0E-3117129IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011042.48718133IPR001789Signal transduction response regulator, receiver domain
PfamPF000721.7E-2419128IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.70E-3020133No hitNo description
SuperFamilySSF466893.4E-17197256IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.0E-28197257IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-21199252IPR006447Myb domain, plants
PfamPF002491.6E-7201251IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MDNGCFSSPR RDFPAGLRVL VVDDDPTWLK ILEKMLKKCN YEVTTCCLAR HALNLLRERK  60
DGYDIVISDV NMPDMDGFKL LELVGLEMDL PVIMMSVDGE TSRVMKGVQH GACDYLLKPI  120
RMKELRNIWQ HVFRKRIHEA REFESFESFE NIHLMRNGSE QSDDGNLFAV EDVTSTKKRK  180
DADNKHYDKE CLDPSSTKKA RVVWSVDLHQ KFVKAVNQIG FDKVGPKKIL DLMNVPWLTR  240
ENVASHLQKY RLYLSRIQKE NDQRSSSSGM KHSDFPSKDL ASFGFQNSVN KQQNDVPVDS  300
YNFSDGSLQP KNVETKSREG EPKGIIPQST IAEKGRALTG NIADTNMREG FRVSLNQPFV  360
PLESEGNRSV FDCSMPTQYS WTEVPHLQLK EDHKSLVNLG DNFSQLPLQG KQHHIQVDQS  420
QSIASISSTP SITDEEVAAC IEPKPLFADY KNDYATSVCS IGNAVVDTFP IQPGSLVMND  480
QSSEPISTTN SGLKTQGYNN LSSTSDLEIY QRNLLLDEDL HFYWLQGESY NMNFGLQNIG  540
MSEY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A8e-18195257163ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_19358
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020213879.10.0two-component response regulator ORR26
TrEMBLA0A151U8X30.0A0A151U8X3_CAJCA; Two-component response regulator ARR11
STRINGGLYMA11G37480.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF39993360
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67710.11e-120response regulator 11