PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_18380 | ||||||||
Common Name | KK1_018916 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | bZIP | ||||||||
Protein Properties | Length: 223aa MW: 25502.9 Da PI: 9.0772 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.4 | 8.3e-10 | 44 | 86 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 + k rr+++NReAAr+sR++Kka++++Le +L++ ++L C.cajan_18380 44 DQKTLRRLAQNREAARKSRLKKKAYVQQLESSRLKLTQLEQEL 86 568899************************9777777666555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.9E-9 | 38 | 89 | No hit | No description |
SMART | SM00338 | 1.2E-7 | 42 | 105 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.3E-7 | 42 | 88 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.266 | 44 | 88 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.0E-7 | 46 | 89 | No hit | No description |
CDD | cd14708 | 2.55E-23 | 46 | 98 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 49 | 64 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.2E-32 | 132 | 204 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence Send to blast |
MADASPRTDI STDVDTDDKN QLYDRNLSIV AVSDSSDRSK DKSDQKTLRR LAQNREAARK 60 SRLKKKAYVQ QLESSRLKLT QLEQELQRAR QQGIFISSSG DQAHTLSGNG ISWAMQFDAE 120 YARWLEEQNR QTNELRAAVN SHASDTELRM IVDGILAHYD EIFRLKGVAA KADVFHLLSG 180 MWKTPAERCF LWLGGFRSSE LLKVRLHCLF SYTLILFFVV LMV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_18380 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF402608 | 0.0 | AF402608.1 Phaseolus vulgaris TGA-type basic leucine zipper protein TGA2.1 mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_029128002.1 | 1e-142 | transcription factor TGA2.2 isoform X2 | ||||
Refseq | XP_029128003.1 | 1e-142 | transcription factor TGA2.2 isoform X2 | ||||
Refseq | XP_029128004.1 | 1e-142 | transcription factor TGA2.2 isoform X2 | ||||
Refseq | XP_029128005.1 | 1e-142 | transcription factor TGA2.2 isoform X2 | ||||
Swissprot | Q39140 | 1e-111 | TGA6_ARATH; Transcription factor TGA6 | ||||
TrEMBL | A0A151TBB7 | 1e-163 | A0A151TBB7_CAJCA; Transcription factor TGA6 | ||||
STRING | XP_007133721.1 | 1e-135 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1470 | 34 | 94 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 5e-94 | TGACG motif-binding factor 6 |