PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15558
Common NameKK1_016007
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ARR-B
Protein Properties Length: 498aa    MW: 55326.3 Da    PI: 6.0753
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15558genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like81.11.2e-25192245155
        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    kpr+ Wt++LH++F++av+q+ G +kA+Pk+ile+m+++ Lt+++v+SHLQkYR 
  C.cajan_15558 192 KPRVIWTENLHSKFLKAVKQI-GDDKAVPKKILEVMNIPHLTRDNVASHLQKYRQ 245
                    79*******************.9*******************************5 PP
2Response_reg67.56.1e-23171231109
                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTE CS
   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGa 94 
                    +l +d +p+v+e ++q++   +y +v +++++++al+l++e++  +D+il+ + mp+mdG+e+l++ ++   ++p+iv++a ++++ + +a+  Ga
  C.cajan_15558  17 ILAIDHDPTVLEFIKQICGGLQY-QVVTCTESPSALNLARERRgyIDVILMELHMPNMDGHEFLQHVKK---EIPVIVMSADDAKSSIMKAVANGA 108
                    7889*******************.9999999********999999**********************99...57********************** PP

                    SEEEESS--HHHHHH CS
   Response_reg  95 kdflsKpfdpeelvk 109
                     d+  Kpf++++  +
  C.cajan_15558 109 CDYWIKPFHKNQFKN 123
                    *********999765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.40.50.23001.4E-3114162No hitNo description
SuperFamilySSF521721.57E-2814138IPR011006CheY-like superfamily
SMARTSM004482.3E-2215125IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS5011035.36116129IPR001789Signal transduction response regulator, receiver domain
PfamPF000726.8E-1917123IPR001789Signal transduction response regulator, receiver domain
CDDcd001564.07E-2218129No hitNo description
Gene3DG3DSA:1.10.10.602.1E-25190246IPR009057Homeodomain-like
SuperFamilySSF466894.66E-18190248IPR009057Homeodomain-like
TIGRFAMsTIGR015571.9E-24192245IPR006447Myb domain, plants
PfamPF002495.9E-6197244IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    Send to blast
MAEIPNEASQ FSAGLRILAI DHDPTVLEFI KQICGGLQYQ VVTCTESPSA LNLARERRGY  60
IDVILMELHM PNMDGHEFLQ HVKKEIPVIV MSADDAKSSI MKAVANGACD YWIKPFHKNQ  120
FKNMWTHVAR KAMIENKNFG RLDGAHCRKR EKNYSEFGSS TVIDATGGVV CSSREPDEVH  180
ESNDSYQPPA KKPRVIWTEN LHSKFLKAVK QIGDDKAVPK KILEVMNIPH LTRDNVASHL  240
QKYRQLTKAT SNEATQQQNE MPLPNIIKET TESRVAAPVR VDFQSLTAPS HVSNNTLATL  300
NPSLPSNLIS KEEHSTPSIQ LLNHSHPEQG VTHGHPSNIA IANNFPQPII DPSIYGVLMD  360
ILQQQQQQRQ QTIMMHHQIS PQTSSMMISG NPSFLTQNIN YGLVSPQTIT PLGAAQVHDA  420
NNFGFTSGDM RFFPSPASDE LVPDGSISGD FTYQEYTNIP PSSLEDTLFA SASINPNFSE  480
DIVDGNTTKE DEPNQEAL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-18191251464ARR10-B
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15558
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020220449.10.0two-component response regulator ORR21
TrEMBLA0A151T3780.0A0A151T378_CAJCA; Two-component response regulator ARR2
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14524517
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.16e-60response regulator 2