PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_15551
Common NameKK1_016000
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family HSF
Protein Properties Length: 362aa    MW: 41652.9 Da    PI: 4.7556
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_15551genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind111.36.9e-35151062102
                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS
   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 
                    Flkk y+++ed++++++i+ws+ g+sfv++d ++f+ ++Lp+yFkh+nf+SF+RQLn+YgF+k++++          weF++++F +g+k+ll++i
  C.cajan_15551  15 FLKKCYDMVEDQNTDSVIRWSHGGDSFVISDLTQFSVTLLPSYFKHNNFSSFIRQLNIYGFRKIDTDC---------WEFANENFVRGQKQLLKNI 101
                    9***************************************************************9987.........******************* PP

                    XXXXX CS
   HSF_DNA-bind  98 krkks 102
                    +r+k+
  C.cajan_15551 102 HRRKH 106
                    **986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.109.1E-3711104IPR011991Winged helix-turn-helix DNA-binding domain
SMARTSM004156.4E-5411104IPR000232Heat shock factor (HSF)-type, DNA-binding
SuperFamilySSF467854.22E-3411104IPR011991Winged helix-turn-helix DNA-binding domain
PRINTSPR000561.7E-181538IPR000232Heat shock factor (HSF)-type, DNA-binding
PfamPF004475.0E-3115104IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.7E-185365IPR000232Heat shock factor (HSF)-type, DNA-binding
PROSITE patternPS0043405478IPR000232Heat shock factor (HSF)-type, DNA-binding
PRINTSPR000561.7E-186678IPR000232Heat shock factor (HSF)-type, DNA-binding
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MVKSNDNGSV SVPPFLKKCY DMVEDQNTDS VIRWSHGGDS FVISDLTQFS VTLLPSYFKH  60
NNFSSFIRQL NIYGFRKIDT DCWEFANENF VRGQKQLLKN IHRRKHPHIA DQQKALPQKD  120
NCEEPSQEAP NHGLWKEVEN LKSDKNSLTQ ELVKLRQHQE SAEKKLLRLS DRIQGMEKHQ  180
QQMLSFLVMV VQSPGFMVQL LQPKENNWRL AESWNILDQD KQDDRPVPSD GMIVKYKPPV  240
GEKLKPVVPL SPGFDTQPDP EFSADGLKDL CISSEFLKVL LDEKLSPLEN HSPFLVPDLP  300
DDGLWEQLFL GSPFLGNTED SNKESEGRTD NEMEMEPITS ETPNEYSRTF ESMVVEMEKA  360
QE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5d5u_B3e-25210416129Heat shock factor protein 1
5d5v_B3e-25210416129Heat shock factor protein 1
5d5v_D3e-25210416129Heat shock factor protein 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that specifically binds DNA sequence 5'-AGAAnnTTCT-3' known as heat shock promoter elements (HSE).
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_15551
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2358700.0AC235870.2 Glycine max clone GM_WBb0130P22, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222031.10.0heat stress transcription factor A-8
RefseqXP_020222032.10.0heat stress transcription factor A-8
SwissprotQ9S7U52e-92HSFA8_ARATH; Heat stress transcription factor A-8
TrEMBLA0A151T3750.0A0A151T375_CAJCA; Heat stress transcription factor A-8
STRINGGLYMA08G05220.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF104192937
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67970.19e-95heat shock transcription factor A8